MDP0000589558 (Malus domestica)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 MDP0000589558 T323585_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.934 0.813
SPL14
M02470_2.00 		Arabidopsis thaliana
NNNRTACNN
NNGTAYNNN		 PBM
Weirauch et al.(2014)
pTH8191 		0.932 0.747
SPL14
M07253_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL14_col_a 		0.932 0.747
SPL14
M11270_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPL14_01 		0.932 0.747
POPTR_0002s00440
M02477_2.00 		Populus trichocarpa
NGTACGG
CCGTACN		 PBM
Weirauch et al.(2014)
pTH9280 		0.930 0.720
SPL4
M02472_2.00 		Arabidopsis thaliana
NRTACDDNN
NNHHGTAYN		 PBM
Weirauch et al.(2014)
pTH7408 		0.928 0.680
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.924 0.707
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.924 0.733
AT1G76580
M02473_2.00 		Arabidopsis thaliana
NNNRTAYNNN
NNNRTAYNNN		 PBM
Weirauch et al.(2014)
pTH8668 		0.923 0.733
PK22320.1
M02483_2.00 		Cannabis sativa
NNGTACGGNN
NNCCGTACNN		 PBM
Weirauch et al.(2014)
pTH9723 		0.913 0.693
PRUPE_ppa000682mg
M02478_2.00 		Prunus persica
NNNNGTACGD
HCGTACNNNN		 PBM
Weirauch et al.(2014)
pTH9281 		0.909 0.720
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.908 0.707
SPL5
M02474_2.00 		Arabidopsis thaliana
NNGTACGDN
NHCGTACNN		 PBM
Weirauch et al.(2014)
pTH7385 		0.897 0.653
SPL5
M07261_2.00 		Arabidopsis thaliana
NDNYGTACGGAH
DTCCGTACRNHN		 Dap-seq
OMalley et al.(2016)
SPL5_col_a 		0.897 0.653
SPL5
M07262_2.00 		Arabidopsis thaliana
NBGTACGGWH
DWCCGTACVN		 Dap-seq
OMalley et al.(2016)
SPL5_colamp_a 		0.897 0.653
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.894 0.747
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.894 0.747
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.894 0.747
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000589558 SBP 99 173

Links

Other SBP family TFs
Other Malus domestica TFs

561 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB00260.1 Alternaria brassicicola AB00260.1 I
AOL_s00075g18 Arthrobotrys oligospora AOL_s00075g18 I
AGOS_AER314W Ashbya gossypii AGOS_AER314W I
fgenesh1_pm.00866_#_491 Aspergillus carbonarius fgenesh1_pm.00866_#_491 I
ACLA_040020 Aspergillus clavatus CADACLAG00003199 I
CADAFLAG00002414 Aspergillus flavus CADAFLAG00002414 I
CADANGAG00002342 Aspergillus niger CADANGAG00002342 I
CADAORAG00001369 Aspergillus oryzae CADAORAG00001369 I
EURHEDRAFT_516147 Aspergillus ruber EURHEDRAFT_516147 I
ATEG_04171 Aspergillus terreus CADATEAG00009984 D
M437DRAFT_82573 Aureobasidium melanogenum M437DRAFT_82573 I
M438DRAFT_345498 Aureobasidium pullulans M438DRAFT_345498 I
AUEXF2481DRAFT_40998 Aureobasidium subglaciale AUEXF2481DRAFT_40998 I
COCC4DRAFT_127765 Bipolaris maydis COCC4DRAFT_127765 I
COCMIDRAFT_2266 Bipolaris oryzae COCMIDRAFT_2266 I
COCSADRAFT_125307 Bipolaris sorokiniana COCSADRAFT_125307 I
COCVIDRAFT_88516 Bipolaris victoriae COCVIDRAFT_88516 I
COCCADRAFT_90442 Bipolaris zeicola COCCADRAFT_90442 I
BOTBODRAFT_25870 Botryobasidium botryosum BOTBODRAFT_25870 I
PVAR5_3236 Byssochlamys spectabilis PVAR5_3236 I
CaO19.7017 Candida albicans CaO19.7017 I
CD36_70900 Candida dubliniensis CD36_70900 I
CAGL0G07249g Candida glabrata CAGL0G07249g I
PGUG_00382 Candida guilliermondii PGUG_00382 I
CLUG_04271 Candida lusitaniae CLUG_04271 I
G210_2310 Candida maltosa G210_2310 I
CORT_0H00310 Candida orthopsilosis CORT_0H00310 I
CPAG_00635 Candida parapsilosis CPAG_00635 I
CANTEDRAFT_113041 Candida tenuis CANTEDRAFT_113041 I
CTRG_04888 Candida tropicalis CTRG_04888 I
CLUG_04271 Clavispora lusitaniae CLUG_04271 I
estExt_Genewise1.C_11468 Cochliobolus heterostrophus C5 estExt_Genewise1.C_11468 I
DACRYDRAFT_108097 Dacryopinax sp DACRYDRAFT_108097 I
H072_1197 Dactylellina haptotyla H072_1197 I
DEHA2F22286g Debaryomyces hansenii DEHA2F22286g I
DOTSEDRAFT_142040 Dothistroma septosporum DOTSEDRAFT_142040 I
DRE_07453 Drechslerella stenobrocha DRE_07453 I
EPUS_07220 Endocarpon pusillum EPUS_07220 I
Ecym_4103 Eremothecium cymbalariae Ecym_4103 I
FIBRA_04336 Fibroporia radiculosa FIBRA_04336 I
HCBG_03004 Histoplasma capsulatum HCBG_03004 I
KAFR_0C05600 Kazachstania africana KAFR_0C05600 I
KNAG_0B03460 Kazachstania naganishii KNAG_0B03460 I
KNAG_0C02770 Kazachstania naganishii KNAG_0C02770 I
KLLA0_B01584g Kluyveromyces lactis KLLA0_B01584g I
KLTH0G04686g Kluyveromyces thermotolerans KLTH0G04686g I
Kwal_18450 Kluyveromyces waltii Kwal_18450 I
PAS_chr2-1_0784 Komagataella pastoris PAS_chr2-1_0784 I
KUCA_T00000773001 Kuraishia capsulata KUCA_T00000773001 I
SAKL0G05896g Lachancea kluyveri SAKL0G05896g I
LALA0_S09e00364g Lachancea lanzarotensis LALA0_S09e00364g I
KLTH0G04686g Lachancea thermotolerans KLTH0G04686g I
LEMA_P079180.1 Leptosphaeria maculans LEMA_P079180.1 I
LELG_05443 Lodderomyces elongisporus LELG_05443 I
MPH_01872 Macrophomina phaseolina MPH_01872 I
PGUG_00382 Meyerozyma guilliermondii PGUG_00382 I
MVLG_02993 Microbotryum violaceum MVLG_02993 I
GNLVRS01_PISO0M03048g Millerozyma farinosa GNLVRS01_PISO0M03048g I
GNLVRS01_PISO0N03203g Millerozyma farinosa GNLVRS01_PISO0N03203g I
NCAS_0H02770 Naumovozyma castellii NCAS_0H02770 I
NDAI_0C00850 Naumovozyma dairenensis NDAI_0C00850 I
HPODL_02118 Ogataea parapolymorpha HPODL_02118 I
PABG_04211 Paracoccidioides brasiliensis PABG_04211 I
PAAG_11867 Paracoccidioides sp lutzii PAAG_11867 I
Pc18g00190 Penicillium chrysogenum Pc18g00190 I
PDIP_75510 Penicillium digitatum PDIP_75510 I
PEX1_077160 Penicillium expansum PEX1_077160 I
PITC_036250 Penicillium italicum PITC_036250 I
PMAA_076490 Penicillium marneffei PMAA_076490 I
PDE_04931 Penicillium oxalicum PDE_04931 I
PCH_Pc18g00190 Penicillium rubens PCH_Pc18g00190 I
U727_00433932271 Penicillium solitum U727_00433932271 I
JL09_g4323 Pichia kudriavzevii JL09_g4323 I
XP_002491722.1 Pichia pastoris XP_002491722.1 I
estExt_fgenesh1_pm.C_chr_5.10316 Pichia stipitis estExt_fgenesh1_pm.C_chr_5.10316 I
PIIN_05295 Piriformospora indica PIIN_05295 I
PLEOSDRAFT_1075550 Pleurotus ostreatus PLEOSDRAFT_1075550 I
PredSwiss_CON591.1 Pneumocystis carinii PredSwiss_CON591.1 I
PNEG_03146 Pneumocystis murina PNEG_03146 I
GMDG_01589 Pseudogymnoascus destructans GMDG_01589 I
V499_00333 Pseudogymnoascus pannorum V499_00333 I
PaG_01825 Pseudozyma aphidis PaG_01825 I
PSEUBRA_SCAF1g00359 Pseudozyma brasiliensis PSEUBRA_SCAF1g00359 I
PHSY_003201 Pseudozyma hubeiensis PHSY_003201 I
RHTO_03185 Rhodosporidium toruloides RHTO_03185 I
SU7_2475 Saccharomyces arboricola SU7_2475 I
SU7_2763 Saccharomyces arboricola SU7_2763 I
5532_YDR451C Saccharomyces bayanus 5532_YDR451C I
Scas_Contig641.12 Saccharomyces castellii Scas_Contig641.12 I
YHP1 Saccharomyces cerevisiae YDR451C D
YOX1 Saccharomyces cerevisiae YML027W D
SKUD_123402 Saccharomyces kudriavzevii SKUD_123402 I
5231_YDR451C Saccharomyces mikatae 5231_YDR451C I
17440_YML027W Saccharomyces paradoxus 17440_YML027W I
5594_YDR451C Saccharomyces paradoxus 5594_YDR451C I
AACERI_AaceriAER314W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAER314W I
PICST_65833 Scheffersomyces stipitis PICST_65833 I
SPOG_04875 Schizosaccharomyces cryophilus SPOG_04875 I
SJAG_01157 Schizosaccharomyces japonicus SJAG_01157 I
SOCG_04925 Schizosaccharomyces octosporus SOCG_04925 I
yox1 Schizosaccharomyces pombe SPBC21B10.13c D
SETTUDRAFT_126230 Setosphaeria turcica SETTUDRAFT_126230 I
SPAPADRAFT_57590 Spathaspora passalidarum SPAPADRAFT_57590 I
SPPG_01429 Spizellomyces punctatus SPPG_01429 I
SPPG_04779 Spizellomyces punctatus SPPG_04779 I
sr11633 Sporisorium reilianum sr11633 I
fgenesh1_pg.C_scaffold_6000346 Sporobolomyces roseus fgenesh1_pg.C_scaffold_6000346 N
PMAA_076490 Talaromyces marneffei PMAA_076490 I
TSTA_096850 Talaromyces stipitatus TSTA_096850 I
TBLA_0D01390 Tetrapisispora blattae TBLA_0D01390 I
TBLA_0E02960 Tetrapisispora blattae TBLA_0E02960 I
TPHA_0D02630 Tetrapisispora phaffii TPHA_0D02630 I
TPHA_0K00360 Tetrapisispora phaffii TPHA_0K00360 I
TDEL_0A04320 Torulaspora delbrueckii TDEL_0A04320 I
GSTUM_00011138001 Tuber melanosporum GSTUM_00011138001 I
UHOR_00441 Ustilago hordei UHOR_00441 I
Kpol_1004p50 Vanderwaltozyma polyspora Kpol_1004p50 I
Kpol_1023p80 Vanderwaltozyma polyspora Kpol_1023p80 I
PV09_05311 Verruconis gallopava PV09_05311 I
J056_000182 Wallemia ichthyophaga J056_000182 I
BN7_6497 Wickerhamomyces ciferrii BN7_6497 I
ZBAI_03698 Zygosaccharomyces bailii ZBAI_03698 I
ZBAI_09382 Zygosaccharomyces bailii ZBAI_09382 I
ZYRO0D13596g Zygosaccharomyces rouxii ZYRO0D13596g I