Thhalv10007882m.g (Eutrema salsugineum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Thhalv10007882m.g T323684_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL11
M02471_2.00 		Arabidopsis thaliana
NNNHGTACGGWN
NWCCGTACDNNN		 PBM
Weirauch et al.(2014)
pTH9392 		0.971 0.947
SPL11
M07254_2.00 		Arabidopsis thaliana
HTGTACTDDHH
DDHHAGTACAD		 Dap-seq
OMalley et al.(2016)
SPL11_col100_a 		0.971 0.947
SPL10
M01084_2.00 		Arabidopsis thaliana
NNGTACGRHN
NDYCGTACNN		 PBM
Sullivan et al.(2014)
pTH9749 		0.960 0.947
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10007882m SBP 176 250
Thhalv10007887m SBP 176 250

Links

Other SBP family TFs
Other Eutrema salsugineum TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG006444.1 Alligator sinensis Alligator_sinensis_CCG006444.1 N
Afo_R009643 Aptenodytes forsteri Afo_R009643 N
ENSAMXG00000006289 Astyanax mexicanus ENSAMXG00000006289 N
ENSBTAP00000018782-D1 Bos grunniens ENSBTAP00000018782-D1 N
Brh_R010768 Buceros rhinoceros Brh_R010768 N
ZNF507 Callithrix jacchus ENSCJAG00000018378 N
Aan_R003376 Calypte anna Aan_R003376 N
Cmyd_10014723 Chelonia mydas Cmyd_10014723 N
ENSCSAG00000004822 Chlorocebus sabaeus ENSCSAG00000004822 N
ZNF507 Choloepus hoffmanni ENSCHOG00000006258 N
ZNF507 Dasypus novemcinctus ENSDNOG00000009394 N
ZNF507 Gorilla gorilla ENSGGOG00000010501 N
ZNF507 Homo sapiens ENSG00000168813 N
ENSSTOG00000022278 Ictidomys tridecemlineatus ENSSTOG00000022278 N
ENSP00000348162 Macaca fascicularis ENSP00000348162 N
ZNF507 Macaca mulatta ENSMMUG00000010840 N
ZNF507 Meleagris gallopavo ENSMGAG00000005461 N
Zfp507 Mus musculus ENSMUSG00000044452 N
ZNF507 Ochotona princeps ENSOPRG00000016090 N
ENSOARG00000004147 Ovis aries ENSOARG00000004147 N
ZNF507 Pan troglodytes ENSPTRG00000010789 N
ENSPANG00000010840 Papio anubis ENSPANG00000010840 N
ENSPPYG00000010581 Pongo abelii ENSPPYG00000010581 N
Zfp507 Rattus norvegicus ENSRNOG00000013565 N
ZNF507 Tursiops truncatus ENSTTRG00000017172 N