OGLUM08G08160 (Oryza glumaepatula)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 OGLUM08G08160 T323898_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM08G08160.1 Sigma 70 337 407

Links

Other Sigma 70 family TFs
Other Oryza glumaepatula TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_49.157 Carica papaya evm.TU.supercontig_49.157 N
Ciclev10019094m.g Citrus clementina Ciclev10019094m.g N
Ciclev10019083m.g Citrus clementina Ciclev10019083m.g N
orange1.1g005326m.g Citrus sinensis orange1.1g005326m.g N
orange1.1g005237m.g Citrus sinensis orange1.1g005237m.g N
Gorai.008G106000 Gossypium raimondii Gorai.008G106000 N
cassava19916.m1 Manihot esculenta cassava19916.m1 N
POPTR_0014s05910 Populus trichocarpa POPTR_0014s05910 N
POPTR_0014s05940 Populus trichocarpa POPTR_0014s05940 N
POPTR_0002s14550 Populus trichocarpa POPTR_0002s14550 N
30174.m008828 Ricinus communis 30174.m008828 N
SapurV1A.0033s0460 Salix purpurea SapurV1A.0033s0460 N
SapurV1A.0033s0490 Salix purpurea SapurV1A.0033s0490 N
SapurV1A.0248s0400 Salix purpurea SapurV1A.0248s0400 N
SapurV1A.0382s0350 Salix purpurea SapurV1A.0382s0350 N
SapurV1A.1971s0010 Salix purpurea SapurV1A.1971s0010 N
TCM_005571 Theobroma cacao TCM_005571 N
VIT_15s0048g00270 Vitis vinifera VIT_15s0048g00270 N