CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CBG16541
(
Caenorhabditis briggsae
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03165 (MH1)
IPR003619
CBG16541
T324409_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG16541
SMAD
28
134
CEKAVEALVKKLKKKNNGCGTLEDLECVLANPTPNSRCITIPKSLDGRLQVSHKKGLPHVIYCRVWRWPDINTQHELRSIETCSYPYESSSKTMYICINPYHYQRLT
Links
Other
SMAD
family TFs
Other
Caenorhabditis briggsae
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_05759
Ancylostoma caninum
ANCCAN_05759
N
0.706
ACAC_0000906701
Angiostrongylus cantonensis
ACAC_0000906701
N
0.706
CBN04759
Caenorhabditis brenneri
CBN04759
N
0.951
sma-3
Caenorhabditis elegans
WBGene00004857
N
0.922
CJA17204
Caenorhabditis japonica
CJA17204
N
0.922
CRE25068
Caenorhabditis remanei
CRE25068
N
0.971
DICVIV_05604
Dictyocaulus viviparus
DICVIV_05604
N
0.716
HCOI01110700
Haemonchus contortus
HCOI01110700
N
0.706
HPLM_0000851001
Haemonchus placei
HPLM_0000851001
N
0.706
HPBE_0001627301
Heligmosomoides bakeri
HPBE_0001627301
N
0.706
NECAME_03891
Necator americanus
NECAME_03891
N
0.706
scaffold778-EXSNAP2012.5
Pristionchus exspectatus
scaffold778-EXSNAP2012.5
N
0.725
SVUK_0001208601
Strongylus vulgaris
SVUK_0001208601
N
0.706
SMUV_0000762601
Syphacia muris
SMUV_0000762601
I
0.706
TELCIR_10810
Teladorsagia circumcincta
TELCIR_10810
N
0.706