NEMVEDRAFT_v1g18576 (Nematostella vectensis)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 NEMVEDRAFT_v1g18576 T325163_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad4
M05889_2.00 		Mus musculus
KCYAGACR
YGTCTRGM		 SMiLE-seq
Isakova et al.(2017)
Smad4 		0.765 0.765
Med
M06447_2.00 		Drosophila melanogaster
KCGBCDKKSHVT
ABDSMMHGVCGM		 B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655 		0.765 0.765
SMAD4
M09377_2.00 		Homo sapiens
DRGTGNSAGACWN
NWGTCTSNCACYH		 Misc
Kulakovskiy et al.(2013)
SMAD4_HUMAN.H11MO.0.B 		0.765 0.765
Smad4
M09382_2.00 		Mus musculus
DGWGNBAGVCWN
NWGBCTVNCWCH		 Misc
Kulakovskiy et al.(2013)
SMAD4_MOUSE.H11MO.0.A 		0.765 0.765
SMAD4
M09634_2.00 		Homo sapiens
NNNYGTCTGS
SCAGACRNNN		 Misc
Heinz et al.(2010)
ESC-SMAD4_GSE29422 		0.765 0.765
Med
M09693_2.00 		Drosophila melanogaster
YYBYVYCTGYY
RRCAGRBRVRR		 Misc
Kulakovskiy et al.(2009)
Med 		0.765 0.765
SMAD4
M11275_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q4 		0.765 0.765
SMAD4
M11276_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6_01 		0.765 0.765
SMAD4
M11277_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6 		0.765 0.765
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDO37590 SMAD 10 111

Links

Other SMAD family TFs
Other Nematostella vectensis TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL014151 Aedes aegypti AAEL014151 N
ADIR001850 Anopheles dirus ADIR001850 N
AMIN008765 Anopheles minimus AMIN008765 N
ASTEI11594 Anopheles stephensi ASTEI11594 N
ENSP00000216513-D1 Bos grunniens ENSP00000216513-D1 N
CpipJ_CPIJ015450 Culex pipiens CpipJ_CPIJ015450 N
CPIJ015450 Culex quinquefasciatus CPIJ015450 N
DILT_0000658401 Diphyllobothrium latum DILT_0000658401 N
ECPE_0000004201 Echinostoma caproni ECPE_0000004201 N
HCOI00435100 Haemonchus contortus HCOI00435100 N
HCOI01447600 Haemonchus contortus HCOI01447600 N
ENSP00000216513 Macaca fascicularis ENSP00000216513 N
SNAPOd2T00003146001 Oikopleura dioica SNAPOd2T00003146001 N
ENSOANG00000014327 Ornithorhynchus anatinus ENSOANG00000014327 I
PPAI009697 Phlebotomus papatasi PPAI009697 N
PXEA_0002543701 Protopolystoma xenopodis PXEA_0002543701 N
SMTD_0000732001 Schistosoma mattheei SMTD_0000732001 N