maker-nMf.1.1.scaf04862-augustus-gene-0.4 (Meloidogyne floridensis)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 maker-nMf.1.1.scaf04862-augustus-gene-0.4 T325801_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mad
M06446_2.00 		Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC		 B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648 		0.716 0.716
Mad
M08427_2.00 		Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS		 ChIP-chip
Mathelier et al.(2014)
MA0535.1 		0.716 0.716
Mad
M09692_2.00 		Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM		 Misc
Kulakovskiy et al.(2009)
Mad 		0.716 0.716
Mad
M11293_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$MAD_Q6 		0.716 0.716
SMAD1
M11286_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_01 		0.716 0.716
SMAD1
M11287_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_Q6 		0.716 0.716
SMAD9
M11274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_01 		0.716 0.716
Smad9
M11290_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_02 		0.716 0.716
Smad9
M11289_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_03 		0.716 0.716
Smad5
M11288_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_01 		0.706 0.706
Smad5
M11292_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_03 		0.706 0.706
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf04862-augustus-gene-0.4-mRNA-1 SMAD 27 132

Links

Other SMAD family TFs
Other Meloidogyne floridensis TFs

339 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_047960 Acremonium chrysogenum ACRE_047960 I 0.000
AOL_s00078g183 Arthrobotrys oligospora AOL_s00078g183 I 0.000
BBA_05317 Beauveria bassiana BBA_05317 I 0.000
COCC4DRAFT_131281 Bipolaris maydis COCC4DRAFT_131281 I 0.000
COCMIDRAFT_104594 Bipolaris oryzae COCMIDRAFT_104594 I 0.000
COCSADRAFT_92438 Bipolaris sorokiniana COCSADRAFT_92438 I 0.000
COCVIDRAFT_94490 Bipolaris victoriae COCVIDRAFT_94490 I 0.000
COCCADRAFT_85714 Bipolaris zeicola COCCADRAFT_85714 I 0.000
Bcin05g07400 Botrytis cinerea Bcin05g07400 D 0.000
A1O1_05565 Capronia coronata A1O1_05565 I 0.000
PV04_08029 Capronia semiimmersa PV04_08029 I 0.000
CTHT_0054920 Chaetomium thermophilum CTHT_0054920 I 0.000
G647_02529 Cladophialophora carrionii G647_02529 I 0.000
A1O7_07556 Cladophialophora yegresii A1O7_07556 I 0.000
e_gw1.3.38.1 Cochliobolus heterostrophus C5 e_gw1.3.38.1 I 0.000
CFIO01_10853 Colletotrichum fioriniae CFIO01_10853 I 0.000
CGGC5_11802 Colletotrichum gloeosporioides CGGC5_11802 I 0.000
GLRG_00660 Colletotrichum graminicola GLRG_00660 I 0.000
CH063_10117 Colletotrichum higginsianum CH063_10117 I 0.000
Cob_13345 Colletotrichum orbiculare Cob_13345 I 0.000
CSUB01_12250 Colletotrichum sublineola CSUB01_12250 I 0.000
W97_03429 Coniosporium apollinis W97_03429 I 0.000
CCM_07661 Cordyceps militaris CCM_07661 I 0.000
estExt_fgenesh1_pg.C_40812 Cryphonectria parasitica estExt_fgenesh1_pg.C_40812 I 0.000
HMPREF1541_08013 Cyphellophora europaea HMPREF1541_08013 I 0.000
H072_5123 Dactylellina haptotyla H072_5123 I 0.000
DRE_06035 Drechslerella stenobrocha DRE_06035 I 0.000
EV44_g4546 Erysiphe necator EV44_g4546 I 0.000
HMPREF1120_07798 Exophiala dermatitidis HMPREF1120_07798 I 0.000
PV06_09524 Exophiala oligosperma PV06_09524 I 0.000
PV11_08966 Exophiala sideris PV11_08966 I 0.000
PV08_03946 Exophiala spinifera PV08_03946 I 0.000
PV05_10063 Exophiala xenobiotica PV05_10063 I 0.000
FFUJ_04086 Fusarium fujikuroi FFUJ_04086 I 0.000
FGRRES_17192 Fusarium graminearum FGRRES_17192 I 0.000
FOXG_05918 Fusarium oxysporum FOXG_05918 I 0.000
FPSE_09716 Fusarium pseudograminearum FPSE_09716 I 0.000
NechaG31542 Fusarium solani NechaG31542 I 0.000
FVEG_03789 Fusarium verticillioides FVEG_03789 I 0.000
GGTG_00966 Gaeumannomyces graminis GGTG_00966 I 0.000
MPH_00528 Macrophomina phaseolina MPH_00528 I 0.000
MGG_17060 Magnaporthe oryzae MGG_17060 I 0.000
MAPG_07711 Magnaporthe poae MAPG_07711 I 0.000
MBM_03422 Marssonina brunnea MBM_03422 I 0.000
MAC_06599 Metarhizium acridum MAC_06599 I 0.000
MAM_07569 Metarhizium album MAM_07569 I 0.000
MANI_121568 Metarhizium anisopliae MANI_121568 I 0.000
MBR_08632 Metarhizium brunneum MBR_08632 I 0.000
MGU_07934 Metarhizium guizhouense MGU_07934 I 0.000
MAJ_09934 Metarhizium majus MAJ_09934 I 0.000
X797_008205 Metarhizium robertsii X797_008205 I 0.000
MYCTH_2295212 Myceliophthora thermophila MYCTH_2295212 I 0.000
e_gw1.1.1349.1 Nectria haematococca e_gw1.1.1349.1 I 0.000
UCRNP2_4523 Neofusicoccum parvum UCRNP2_4523 I 0.000
NCU02576 Neurospora crassa NCU02576 D 0.000
estExt_fgenesh2_pg.C_20614 Neurospora discreta estExt_fgenesh2_pg.C_20614 I 0.000
NEUTE1DRAFT_73358 Neurospora tetrasperma NEUTE1DRAFT_73358 I 0.000
OIDMADRAFT_43859 Oidiodendron maius OIDMADRAFT_43859 I 0.000
F503_05162 Ophiostoma piceae uamh F503_05162 I 0.000
PFICI_13658 Pestalotiopsis fici PFICI_13658 I 0.000
PODANS_1_8960 Podospora anserina PODANS_1_8960 I 0.000
GMDG_00720 Pseudogymnoascus destructans GMDG_00720 I 0.000
V499_02224 Pseudogymnoascus pannorum V499_02224 I 0.000
PTT_01647 Pyrenophora teres PTT_01647 I 0.000
Z518_09159 Rhinocladiella mackenziei Z518_09159 I 0.000
SAPIO_CDS5525 Scedosporium apiospermum SAPIO_CDS5525 I 0.000
SBOR_8563 Sclerotinia borealis SBOR_8563 I 0.000
SS1G_12158 Sclerotinia sclerotiorum SS1G_12158 I 0.000
SETTUDRAFT_160027 Setosphaeria turcica SETTUDRAFT_160027 I 0.000
SMAC_05786 Sordaria macrospora SMAC_05786 I 0.000
S40288_06487 Stachybotrys chartarum S40288_06487 I 0.000
S40285_06932 Stachybotrys chlorohalonata S40285_06932 I 0.000
THITE_2122040 Thielavia terrestris THITE_2122040 I 0.000
VHEMI03709 Torrubiella hemipterigena VHEMI03709 I 0.000
TRIATDRAFT_323311 Trichoderma atroviride TRIATDRAFT_323311 I 0.000
TRIREDRAFT_108940 Trichoderma reesei TRIREDRAFT_108940 I 0.000
TRIVIDRAFT_85198 Trichoderma virens TRIVIDRAFT_85198 I 0.000
GSTUM_00008737001 Tuber melanosporum GSTUM_00008737001 I 0.000
UV8b_6694 Ustilaginoidea virens UV8b_6694 I 0.000
PV09_04867 Verruconis gallopava PV09_04867 I 0.000
VDBG_03734 Verticillium albo atrum VDBG_03734 I 0.000