ENSLACG00000004599 (Latimeria chalumnae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSLACG00000004599 T328223_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.632 0.768
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000005178 Sox 104 172
ENSLACP00000021993 Sox 104 172

Links

Other Sox family TFs
Other Latimeria chalumnae TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000018175 Ailuropoda melanoleuca ENSAMEG00000018175 N
ENSP00000389716-D1 Bos grunniens ENSP00000389716-D1 N
MXD3 Bos taurus ENSBTAG00000005010 N
ENSCJAG00000006943 Callithrix jacchus ENSCJAG00000006943 N
Aan_R001830 Calypte anna Aan_R001830 N
MXD3 Canis familiaris ENSCAFG00000016437 N
ENSCSAG00000008875 Chlorocebus sabaeus ENSCSAG00000008875 N
MXD3 Dasypus novemcinctus ENSDNOG00000017403 N
MXD3 Echinops telfairi ENSETEG00000010972 N
MXD4 Equus caballus ENSECAG00000002580 N
MXD3 Equus caballus ENSECAG00000021155 N
MXD3 Erinaceus europaeus ENSEEUG00000015798 N
MXD3 Felis catus ENSFCAG00000001533 N
ENSFALG00000000117 Ficedula albicollis ENSFALG00000000117 N
ENSGGOG00000011764 Gorilla gorilla ENSGGOG00000011764 N
MXD3 Homo sapiens ENSG00000213347 N
ENSSTOG00000002697 Ictidomys tridecemlineatus ENSSTOG00000002697 N
MXD3 Loxodonta africana ENSLAFG00000021836 N
ENSMMUP00000033662 Macaca fascicularis ENSMMUP00000033662 N
ENSMMUG00000009047 Macaca mulatta ENSMMUG00000009047 N
ENSMEUG00000013427 Macropus eugenii ENSMEUG00000013427 N
MXD4 Monodelphis domestica ENSMODG00000004033 N
MXD3 Monodelphis domestica ENSMODG00000004791 N
ENSMPUG00000012200 Mustela putorius furo ENSMPUG00000012200 N
Mxd3 Mus musculus ENSMUSG00000021485 N
Myotis_brandtii_MXD3_10032506 Myotis brandtii Myotis_brandtii_MXD3_10032506 N
ENSMLUG00000007019 Myotis lucifugus ENSMLUG00000007019 N
MXD3 Ochotona princeps ENSOPRG00000002125 N
MXD3 Oryctolagus cuniculus ENSOCUG00000022519 N
MXD4 Oryctolagus cuniculus ENSOCUG00000005063 N
MXD3 Otolemur garnettii ENSOGAG00000032370 N
ENSOARG00000004235 Ovis aries ENSOARG00000004235 N
MXD3 Pan troglodytes ENSPTRG00000034491 N
ENSPANG00000007888 Papio anubis ENSPANG00000007888 N
MXD3 Pteropus vampyrus ENSPVAG00000003828 N
Rab24 Rattus norvegicus ENSRNOG00000016539 N
ENSSHAG00000011878 Sarcophilus harrisii ENSSHAG00000011878 N
ENSSHAG00000013431 Sarcophilus harrisii ENSSHAG00000013431 N
MXD3 Sus scrofa ENSSSCG00000014041 N
MXD3 Tursiops truncatus ENSTTRG00000009572 N
mxd3.L Xenopus laevis XB-GENE-867580 N
mxd3 Xenopus tropicalis XB-GENE-867571 N