CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_33465
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_33465
T330110_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA06982
Sox
33
99
SKAPNRFFIYRVAYIKELRKRISNNISMTRISPYISLSWSKEPSEVKEAYKRLSELAENRLKEMRQR
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HpaG807837
Hyaloperonospora arabidopsidis
HpaG807837
N
estExt_fgenesh1_pg.C_110148
Phytophthora capsici
estExt_fgenesh1_pg.C_110148
N
PITG_12304
Phytophthora infestans
PITG_12304
N
fgenesh_scip_prom.46568.971
Phytophthora kernoviae
fgenesh_scip_prom.46568.971
N
fgenesh_scip_prom.28083.6999
Phytophthora lateralis
fgenesh_scip_prom.28083.6999
N
F443_17630
Phytophthora parasitica
F443_17630
N
Phyra84970
Phytophthora ramorum
Phyra84970
N
maker-pag1_scaffold_59-fgenesh-gene-0.7
Pythium aphanidermatum
maker-pag1_scaffold_59-fgenesh-gene-0.7
N
maker-pir_contig_233-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_233-fgenesh-gene-0.3
N
maker-piw_contig_55-fgenesh-gene-0.12
Pythium iwayamai
maker-piw_contig_55-fgenesh-gene-0.12
N
PYU1_G010143
Pythium ultimum
PYU1_G010143
N
maker-pve_contig_691-snap-gene-0.13
Pythium vexans
maker-pve_contig_691-snap-gene-0.13
N