NEMVEDRAFT_v1g243341 (Nematostella vectensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 NEMVEDRAFT_v1g243341 T331486_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EDO40495 Sox 114 186

Links

Other Sox family TFs
Other Nematostella vectensis TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA05G32590 Glycine max GLYMA05G32590 I
LPERR04G10110 Leersia perrieri LPERR04G10110 N
GSMUA_Achr6G17670_001 Musa acuminata GSMUA_Achr6G17670_001 N
OBART04G13350 Oryza barthii OBART04G13350 N
OB04G20560 Oryza brachyantha OB04G20560 N
ORGLA04G0103800 Oryza glaberrima ORGLA04G0103800 N
OGLUM04G13190 Oryza glumaepatula OGLUM04G13190 N
BGIOSGA016453 Oryza indica BGIOSGA016453 N
OLONG_015951 Oryza longistaminata OLONG_015951 N
OMERI04G11960 Oryza meridionalis OMERI04G11960 N
ONIVA04G11520 Oryza nivara ONIVA04G11520 N
ORUFI04G14570 Oryza rufipogon ORUFI04G14570 N
OS04G0437000 Oryza sativa OS04G0437000 N
Pavir.Aa01694 Panicum virgatum Pavir.Aa01694 N
Pavir.Ab01921 Panicum virgatum Pavir.Ab01921 N
Pavir.Da00408 Panicum virgatum Pavir.Da00408 N
Pavir.Ga01785 Panicum virgatum Pavir.Ga01785 N
Pavir.J14631 Panicum virgatum Pavir.J14631 N
Pavir.J27766 Panicum virgatum Pavir.J27766 N
Si011079m.g Setaria italica Si011079m.g N
Si018368m.g Setaria italica Si018368m.g N
Sb04g022672 Sorghum bicolor Sb04g022672 N
Sb06g017190 Sorghum bicolor Sb06g017190 N
GRMZM2G316840 Zea mays GRMZM2G316840 N