CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PHLGIDRAFT_91671
(
Phlebiopsis gigantea
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PHLGIDRAFT_91671
T331950_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIP05818
Sox
100
168
PKRPPSSYLLFQNEVRQELKTKHPNISNNELLAKISKAWSEMPREQKDRYEARQAIAKNNYEEQKKQYA
Links
Other
Sox
family TFs
Other
Phlebiopsis gigantea
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_191645
Agaricus bisporus
AGABI2DRAFT_191645
N
0.580
M378DRAFT_22958
Amanita muscaria
M378DRAFT_22958
N
0.615
CERSUDRAFT_111715
Ceriporiopsis subvermispora
CERSUDRAFT_111715
N
0.491
CC1G_11400
Coprinopsis cinerea
CC1G_11400
N
0.521
L804_03290
Cryptococcus gattii
L804_03290
N
0.436
CNE04220
Cryptococcus neoformans
CNE04220
N
0.436
FIBRA_06118
Fibroporia radiculosa
FIBRA_06118
N
0.486
FOMPIDRAFT_1116461
Fomitopsis pinicola
FOMPIDRAFT_1116461
N
0.567
GALMADRAFT_227586
Galerina marginata
GALMADRAFT_227586
N
0.623
GLOTRDRAFT_119701
Gloeophyllum trabeum
GLOTRDRAFT_119701
N
0.497
M413DRAFT_292945
Hebeloma cylindrosporum
M413DRAFT_292945
N
0.591
HelroG82753
Helobdella robusta
HelroG82753
N
0.419
estExt_fgenesh3_kg.C_40392
Heterobasidion annosum
estExt_fgenesh3_kg.C_40392
N
0.476
HETIRDRAFT_439181
Heterobasidion irregulare
HETIRDRAFT_439181
N
0.476
JAAARDRAFT_96982
Jaapia argillacea
JAAARDRAFT_96982
N
0.451
K443DRAFT_167654
Laccaria amethystina
K443DRAFT_167654
N
0.560
LACBIDRAFT_294914
Laccaria bicolor
LACBIDRAFT_294914
N
0.514
nOo.2.0.1.g04260
Onchocerca ochengi
nOo.2.0.1.g04260
N
0.418
WBGene00246010
Onchocerca volvulus
WBGene00246010
N
0.418
PHACADRAFT_250106
Phanerochaete carnosa
PHACADRAFT_250106
N
0.637
e_gwh2.2.1019.1
Phanerochaete chrysosporium
e_gwh2.2.1019.1
N
0.627
PILCRDRAFT_819051
Piloderma croceum
PILCRDRAFT_819051
N
0.535
PLEOSDRAFT_1102853
Pleurotus ostreatus
PLEOSDRAFT_1102853
N
0.456
POSPLDRAFT_104147
Postia placenta
POSPLDRAFT_104147
N
0.516
CY34DRAFT_801789
Suillus luteus
CY34DRAFT_801789
N
0.426
BN946_scf185043.g242
Trametes cinnabarina
BN946_scf185043.g242
N
0.511
M407DRAFT_143647
Tulasnella calospora
M407DRAFT_143647
N
0.477