CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PSEUBRA_SCAF25g00980
(
Pseudozyma brasiliensis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PSEUBRA_SCAF25g00980
T332212_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EST06761
Sox
131
204
PKRPPSAYLLFQNEVRQEIRKKHPGMPYAEVLGKVSEAWKALTDEQRRVYQDKTTENMATWSQQKKDHEAEMAE
Links
Other
Sox
family TFs
Other
Pseudozyma brasiliensis
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BOTBODRAFT_90657
Botryobasidium botryosum
BOTBODRAFT_90657
N
0.470
L804_03290
Cryptococcus gattii
L804_03290
N
0.442
CNE04220
Cryptococcus neoformans
CNE04220
N
0.442
estExt_fgenesh3_kg.C_40392
Heterobasidion annosum
estExt_fgenesh3_kg.C_40392
N
0.434
HETIRDRAFT_439181
Heterobasidion irregulare
HETIRDRAFT_439181
N
0.434
PHACADRAFT_250106
Phanerochaete carnosa
PHACADRAFT_250106
N
0.436
e_gwh2.2.1019.1
Phanerochaete chrysosporium
e_gwh2.2.1019.1
N
0.437
PAN0_019d5853
Pseudozyma antarctica
PAN0_019d5853
N
0.693
PaG_06234
Pseudozyma aphidis
PaG_06234
N
0.693
PFL1_06779
Pseudozyma flocculosa
PFL1_06779
N
0.635
PHSY_002600
Pseudozyma hubeiensis
PHSY_002600
N
0.725
sr11268
Sporisorium reilianum
sr11268
N
0.731
A1Q1_06955
Trichosporon asahii
A1Q1_06955
N
0.477
UHOR_08733
Ustilago hordei
UHOR_08733
N
0.731
UM06160
Ustilago maydis
UM06160
N
0.731