CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAR015352
(
Strigamia maritima
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SMAR015352
T332643_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMAR015352-PA
Sox
543
609
PKRPQTAFFLWLNENRERIKKETPGIAVTEITKKAGEEWKEVKDKTKWEKLSEEGKKKYEVAMAEYK
Links
Other
Sox
family TFs
Other
Strigamia maritima
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g08227
Acanthocheilonema viteae
nAv.1.0.1.g08227
N
0.415
AAEL011425
Aedes aegypti
AAEL011425
I
0.465
AALB010796
Anopheles albimanus
AALB010796
N
0.422
AATE003884
Anopheles atroparvus
AATE003884
N
0.422
ADAC005115
Anopheles darlingi
ADAC005115
N
0.422
ASIS014507
Anopheles sinensis
ASIS014507
N
0.422
GB54571
Apis mellifera
GB54571
N
0.448
BGIBMGA005288
Bombyx mori
BGIBMGA005288
N
0.458
Bm8632
Brugia malayi
Bm8632
N
0.415
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.446
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.434
hmg-1.1
Caenorhabditis elegans
WBGene00001971
N
0.422
CJA04355
Caenorhabditis japonica
CJA04355
N
0.423
Cflo_11824--XP_001120264.1_APIME
Camponotus floridanus
Cflo_11824--XP_001120264.1_APIME
N
0.439
CpipJ_CPIJ002953
Culex pipiens
CpipJ_CPIJ002953
N
0.452
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.482
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.482
CPIJ002953
Culex quinquefasciatus
CPIJ002953
N
0.452
KGM_13851
Danaus plexippus
KGM_13851
N
0.472
YQE_02071
Dendroctonus ponderosae
YQE_02071
N
0.433
nDi.2.2.2.g08508
Dirofilaria immitis
nDi.2.2.2.g08508
N
0.415
GF12460
Drosophila ananassae
FBgn0089497
N
0.479
GG19998
Drosophila erecta
FBgn0112197
N
0.475
GH21151
Drosophila grimshawi
FBgn0128613
N
0.481
Ssrp
Drosophila melanogaster
FBgn0010278
N
0.479
GI18750
Drosophila mojavensis
FBgn0141489
N
0.525
GL11071
Drosophila persimilis
FBgn0148681
N
0.439
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.439
GD25013
Drosophila simulans
FBgn0196325
N
0.479
GJ21774
Drosophila virilis
FBgn0208892
N
0.475
GK22092
Drosophila willistoni
FBgn0224077
N
0.516
GE11532
Drosophila yakuba
FBgn0229332
N
0.475
Hsal_00538--XP_001120264.1_APIME
Harpegnathos saltator
Hsal_00538--XP_001120264.1_APIME
N
0.473
HMEL015307
Heliconius melpomene
HMEL015307
N
0.458
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.434
TTAC_0000692101
Hydatigera taeniaeformis
TTAC_0000692101
N
0.424
XP_002159252.1
Hydra magnipapillata
XP_002159252.1
I
0.418
HDID_0000239001
Hymenolepis diminuta
HDID_0000239001
N
0.419
HmN_000028000
Hymenolepis microstoma
HmN_000028000
N
0.416
LDEC020995
Leptinotarsa decemlineata
LDEC020995
N
0.468
nLs.2.1.2.g04082
Litomosoides sigmodontis
nLs.2.1.2.g04082
N
0.415
LOAG_08062
Loa loa
LOAG_08062
N
0.415
LCUP005047
Lucilia cuprina
LCUP005047
N
0.421
MDOA007633
Musca domestica
MDOA007633
N
0.487
Ocbimv22006454m.g
Octopus bimaculoides
Ocbimv22006454m.g
N
0.438
SNAPOd2T00016000001
Oikopleura dioica
SNAPOd2T00016000001
N
0.429
nOo.2.0.1.g04693
Onchocerca ochengi
nOo.2.0.1.g04693
N
0.415
WBGene00238628
Onchocerca volvulus
WBGene00238628
N
0.415
PPAI002521
Phlebotomus papatasi
PPAI002521
N
0.496
scaffold113-EXSNAP2012.49
Pristionchus exspectatus
scaffold113-EXSNAP2012.49
N
0.421
scaffold1425-EXSNAP2012.3
Pristionchus exspectatus
scaffold1425-EXSNAP2012.3
N
0.421
Ppa-hmg-1.1
Pristionchus pacificus
PPA22767
N
0.421
Sakowv30021656m.g
Saccoglossus kowalevskii
Sakowv30021656m.g
N
0.484
L596_g16476
Steinernema carpocapsae
L596_g16476
N
0.421
L892_g23618
Steinernema scapterisci
L892_g23618
N
0.421
SPU_023988
Strongylocentrotus purpuratus
SPU_023988
N
0.447
SMUV_0000499601
Syphacia muris
SMUV_0000499601
N
0.456
TASK_0000475801
Taenia asiatica
TASK_0000475801
N
0.424
TsM_000111500
Taenia solium
TsM_000111500
N
0.424
tetur01g10640
Tetranychus urticae
tetur01g10640
N
0.456
TC012866
Tribolium castaneum
TC012866
N
0.416