gw1.6.1665.1 (Ostreococcus RCC809)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 gw1.6.1665.1 T334255_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.429 0.343
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.6.1665.1 Sox 8 74

Links

Other Sox family TFs
Other Ostreococcus RCC809 TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR07G10290 Leersia perrieri LPERR07G10290 N 0.000
OBART07G12230 Oryza barthii OBART07G12230 N 0.000
OB10G16010 Oryza brachyantha OB10G16010 N 0.000
ORGLA10G0057400 Oryza glaberrima ORGLA10G0057400 N 0.000
OGLUM07G11710 Oryza glumaepatula OGLUM07G11710 N 0.000
OGLUM07G11720 Oryza glumaepatula OGLUM07G11720 N 0.000
BGIOSGA024398 Oryza indica BGIOSGA024398 N 0.000
ONIVA07G11150 Oryza nivara ONIVA07G11150 N 0.000
OPUNC07G10920 Oryza punctata OPUNC07G10920 N 0.000
ORUFI07G12350 Oryza rufipogon ORUFI07G12350 N 0.000
OS07G0434300 Oryza sativa OS07G0434300 N 0.000