CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LDEC003494
(
Leptinotarsa decemlineata
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
LDEC003494
T334882_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LDEC003494-PA
Sox
118
186
PEKPLMPYMRYSRKVWDAVKAQNADLKLWEIGKIIGQMWRDLPEEEKNEFVEEYELEKVEYEKTLKTYH
Links
Other
Sox
family TFs
Other
Leptinotarsa decemlineata
TFs
161 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_051010
Acremonium chrysogenum
ACRE_051010
N
Bcin01g08080
Botrytis cinerea
Bcin01g08080
N
A1O1_06448
Capronia coronata
A1O1_06448
N
PV04_06890
Capronia semiimmersa
PV04_06890
N
Z519_03993
Cladophialophora bantiana
Z519_03993
N
G647_06053
Cladophialophora carrionii
G647_06053
N
PV07_03724
Cladophialophora immunda
PV07_03724
N
A1O5_08664
Cladophialophora psammophila
A1O5_08664
N
A1O7_06479
Cladophialophora yegresii
A1O7_06479
N
CPUR_04232
Claviceps purpurea
CPUR_04232
N
CCM_00337
Cordyceps militaris
CCM_00337
N
HMPREF1120_03961
Exophiala dermatitidis
HMPREF1120_03961
N
PV10_08689
Exophiala mesophila
PV10_08689
N
PV06_02579
Exophiala oligosperma
PV06_02579
N
PV11_06703
Exophiala sideris
PV11_06703
N
Z517_00960
Fonsecaea pedrosoi
Z517_00960
N
FFUJ_04132
Fusarium fujikuroi
FFUJ_04132
N
FGRRES_09277
Fusarium graminearum
FGRRES_09277
N
FOXG_14212
Fusarium oxysporum
FOXG_14212
N
FPSE_09669
Fusarium pseudograminearum
FPSE_09669
N
NechaG66814
Fusarium solani
NechaG66814
N
MBM_05804
Marssonina brunnea
MBM_05804
N
MAC_08284
Metarhizium acridum
MAC_08284
N
MAM_02763
Metarhizium album
MAM_02763
N
MANI_026709
Metarhizium anisopliae
MANI_026709
N
MBR_02363
Metarhizium brunneum
MBR_02363
N
MGU_00675
Metarhizium guizhouense
MGU_00675
N
MAJ_00301
Metarhizium majus
MAJ_00301
N
X797_000370
Metarhizium robertsii
X797_000370
N
estExt_Genewise1Plus.C_sca_18_chr2_1_02126
Nectria haematococca
estExt_Genewise1Plus.C_sca_18_chr2_1_02126
N
OIDMADRAFT_41356
Oidiodendron maius
OIDMADRAFT_41356
N
OCS_01259
Ophiocordyceps sinensis
OCS_01259
N
GMDG_02083
Pseudogymnoascus destructans
GMDG_02083
N
Z518_02769
Rhinocladiella mackenziei
Z518_02769
N
SS1G_04655
Sclerotinia sclerotiorum
SS1G_04655
N
SPBR_01645
Sporothrix brasiliensis
SPBR_01645
N
HMPREF1624_03632
Sporothrix schenckii
HMPREF1624_03632
N
S40285_06361
Stachybotrys chlorohalonata
S40285_06361
N
VHEMI03871
Torrubiella hemipterigena
VHEMI03871
N
TRIATDRAFT_298410
Trichoderma atroviride
TRIATDRAFT_298410
N
TRIREDRAFT_65315
Trichoderma reesei
TRIREDRAFT_65315
N
TRIVIDRAFT_208681
Trichoderma virens
TRIVIDRAFT_208681
N