Scas_Contig682.13 (Saccharomyces castellii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Scas_Contig682.13 T334963_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMO1
M11344_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$_HMO1_01 		0.609 0.855
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig682.13 Sox 111 184

Links

Other Sox family TFs
Other Saccharomyces castellii TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGOS_AGL141W Ashbya gossypii AGOS_AGL141W I 0.692
CAGL0E00737g Candida glabrata CAGL0E00737g I 0.703
Ecym_4194 Eremothecium cymbalariae Ecym_4194 I 0.692
KAFR_0B06030 Kazachstania africana KAFR_0B06030 I 0.662
KNAG_0A04840 Kazachstania naganishii KNAG_0A04840 I 0.655
KLTH0F09020g Kluyveromyces thermotolerans KLTH0F09020g I 0.672
PAS_chr2-2_0488 Komagataella pastoris PAS_chr2-2_0488 N 0.431
SAKL0H14234g Lachancea kluyveri SAKL0H14234g I 0.637
LALA0_S03e03444g Lachancea lanzarotensis LALA0_S03e03444g I 0.609
KLTH0F09020g Lachancea thermotolerans KLTH0F09020g I 0.672
GNLVRS01_PISO0I16552g Millerozyma farinosa GNLVRS01_PISO0I16552g N 0.454
GNLVRS01_PISO0J18313g Millerozyma farinosa GNLVRS01_PISO0J18313g N 0.454
NCAS_0B03190 Naumovozyma castellii NCAS_0B03190 I 0.741
NDAI_0A01190 Naumovozyma dairenensis NDAI_0A01190 I 0.726
XP_002491904.1 Pichia pastoris XP_002491904.1 N 0.431
SU7_2586 Saccharomyces arboricola SU7_2586 I 0.609
HMO1 Saccharomyces cerevisiae YDR174W D 0.609
SKUD_149803 Saccharomyces kudriavzevii SKUD_149803 I 0.609
3875_YDR174W Saccharomyces mikatae 3875_YDR174W I 0.609
4397_YDR174W Saccharomyces paradoxus 4397_YDR174W I 0.609
TBLA_0H01020 Tetrapisispora blattae TBLA_0H01020 I 0.597
TBLA_0A01170 Tetrapisispora blattae TBLA_0A01170 I 0.693
TPHA_0C02460 Tetrapisispora phaffii TPHA_0C02460 I 0.679
TDEL_0F04960 Torulaspora delbrueckii TDEL_0F04960 I 0.693
Kpol_1024p24 Vanderwaltozyma polyspora Kpol_1024p24 I 0.692
BN7_2978 Wickerhamomyces ciferrii BN7_2978 I 0.667
ZBAI_01315 Zygosaccharomyces bailii ZBAI_01315 I 0.654
ZBAI_09581 Zygosaccharomyces bailii ZBAI_09581 I 0.654
ZYRO0C03718g Zygosaccharomyces rouxii ZYRO0C03718g I 0.686