CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.4.435.1
(
Cryphonectria parasitica
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
gw1.4.435.1
T335253_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.539
0.733
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.4.435.1
Sox
122
181
PERPPSAYVLFSNSQNLTFTEIAKLVGENWQGLTHTEKEPFERQAQTAKEKFTHDLAEYK
Links
Other
Sox
family TFs
Other
Cryphonectria parasitica
TFs
96 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_011600
Acremonium chrysogenum
ACRE_011600
I
0.534
AB07914.1
Alternaria brassicicola
AB07914.1
I
0.496
M437DRAFT_15090
Aureobasidium melanogenum
M437DRAFT_15090
I
0.507
M438DRAFT_338286
Aureobasidium pullulans
M438DRAFT_338286
I
0.507
AUEXF2481DRAFT_32739
Aureobasidium subglaciale
AUEXF2481DRAFT_32739
I
0.480
BBA_01214
Beauveria bassiana
BBA_01214
I
0.493
COCC4DRAFT_135921
Bipolaris maydis
COCC4DRAFT_135921
I
0.469
COCMIDRAFT_97534
Bipolaris oryzae
COCMIDRAFT_97534
I
0.496
COCSADRAFT_226282
Bipolaris sorokiniana
COCSADRAFT_226282
I
0.496
COCSADRAFT_180514
Bipolaris sorokiniana
COCSADRAFT_180514
I
0.496
COCVIDRAFT_17843
Bipolaris victoriae
COCVIDRAFT_17843
I
0.496
COCVIDRAFT_115390
Bipolaris victoriae
COCVIDRAFT_115390
I
0.496
COCCADRAFT_24603
Bipolaris zeicola
COCCADRAFT_24603
I
0.496
BGHDH14_bgh04339
Blumeria graminis
BGHDH14_bgh04339
I
0.512
Bcin01g08840
Botrytis cinerea
Bcin01g08840
I
0.513
A1O1_01197
Capronia coronata
A1O1_01197
I
0.420
A1O3_08778
Capronia epimyces
A1O3_08778
I
0.420
PV04_00198
Capronia semiimmersa
PV04_00198
I
0.447
CTHT_0053790
Chaetomium thermophilum
CTHT_0053790
I
0.533
Z519_04692
Cladophialophora bantiana
Z519_04692
I
0.447
G647_10093
Cladophialophora carrionii
G647_10093
I
0.420
PV07_09313
Cladophialophora immunda
PV07_09313
I
0.447
A1O5_06047
Cladophialophora psammophila
A1O5_06047
I
0.447
A1O7_01726
Cladophialophora yegresii
A1O7_01726
I
0.420
CPUR_04901
Claviceps purpurea
CPUR_04901
I
0.504
fgenesh1_pm.C_scaffold_14000132
Cochliobolus heterostrophus C5
fgenesh1_pm.C_scaffold_14000132
I
0.469
CFIO01_13531
Colletotrichum fioriniae
CFIO01_13531
I
0.577
CGGC5_9539
Colletotrichum gloeosporioides
CGGC5_9539
I
0.577
GLRG_01394
Colletotrichum graminicola
GLRG_01394
I
0.577
CH063_04081
Colletotrichum higginsianum
CH063_04081
I
0.577
CSUB01_00364
Colletotrichum sublineola
CSUB01_00364
I
0.577
W97_04202
Coniosporium apollinis
W97_04202
I
0.496
CCM_01555
Cordyceps militaris
CCM_01555
I
0.466
HMPREF1541_06859
Cyphellophora europaea
HMPREF1541_06859
I
0.491
DRE_06603
Drechslerella stenobrocha
DRE_06603
I
0.442
ETH_00031100
Eimeria tenella
ETH_00031100
I
0.436
EPUS_09213
Endocarpon pusillum
EPUS_09213
I
0.526
EV44_g2383
Erysiphe necator
EV44_g2383
I
0.474
A1O9_00742
Exophiala aquamarina
A1O9_00742
I
0.452
HMPREF1120_00213
Exophiala dermatitidis
HMPREF1120_00213
I
0.420
PV10_01993
Exophiala mesophila
PV10_01993
I
0.447
PV06_04154
Exophiala oligosperma
PV06_04154
I
0.420
PV11_09703
Exophiala sideris
PV11_09703
I
0.420
PV08_04655
Exophiala spinifera
PV08_04655
I
0.420
PV05_09944
Exophiala xenobiotica
PV05_09944
I
0.420
Z517_02317
Fonsecaea pedrosoi
Z517_02317
I
0.447
FFUJ_02729
Fusarium fujikuroi
FFUJ_02729
I
0.540
FGRRES_07116
Fusarium graminearum
FGRRES_07116
I
0.524
FOXG_01686
Fusarium oxysporum
FOXG_01686
I
0.524
FPSE_02664
Fusarium pseudograminearum
FPSE_02664
I
0.540
GGTG_01518
Gaeumannomyces graminis
GGTG_01518
I
0.589
M7I_1578
Glarea lozoyensis
M7I_1578
I
0.481
CMQ_8074
Grosmannia clavigera
CMQ_8074
I
0.472
LEMA_P064360.1
Leptosphaeria maculans
LEMA_P064360.1
I
0.496
MPH_08050
Macrophomina phaseolina
MPH_08050
I
0.496
MGG_01641
Magnaporthe oryzae
MGG_01641
I
0.588
MAPG_06737
Magnaporthe poae
MAPG_06737
I
0.589
MBM_02410
Marssonina brunnea
MBM_02410
I
0.481
MANI_030028
Metarhizium anisopliae
MANI_030028
I
0.538
MBR_01483
Metarhizium brunneum
MBR_01483
I
0.538
MGU_02157
Metarhizium guizhouense
MGU_02157
I
0.538
MAJ_04030
Metarhizium majus
MAJ_04030
I
0.538
X797_001988
Metarhizium robertsii
X797_001988
I
0.538
MYCTH_2294934
Myceliophthora thermophila
MYCTH_2294934
I
0.524
NCU02819
Neurospora crassa
NCU02819
D
0.539
estExt_fgenesh3_kg.C_40082
Neurospora discreta
estExt_fgenesh3_kg.C_40082
I
0.539
NEUTE1DRAFT_106544
Neurospora tetrasperma
NEUTE1DRAFT_106544
I
0.539
OIDMADRAFT_143526
Oidiodendron maius
OIDMADRAFT_143526
I
0.453
OCS_01486
Ophiocordyceps sinensis
OCS_01486
I
0.598
F503_04824
Ophiostoma piceae uamh
F503_04824
I
0.517
SNOG_03674
Phaeosphaeria nodorum
SNOG_03674
I
0.543
PODANS_1_7390
Podospora anserina
PODANS_1_7390
I
0.547
GMDG_05273
Pseudogymnoascus destructans
GMDG_05273
I
0.500
V499_08602
Pseudogymnoascus pannorum
V499_08602
I
0.513
PTT_17082
Pyrenophora teres
PTT_17082
I
0.496
PTRG_02818
Pyrenophora triticirepentis
PTRG_02818
I
0.496
Z518_04911
Rhinocladiella mackenziei
Z518_04911
I
0.420
RO3G_12049
Rhizopus oryzae
RO3G_12049
N
0.423
RO3G_05645
Rhizopus oryzae
RO3G_05645
N
0.416
SAPIO_CDS3355
Scedosporium apiospermum
SAPIO_CDS3355
I
0.444
SBOR_0403
Sclerotinia borealis
SBOR_0403
I
0.468
SS1G_04584
Sclerotinia sclerotiorum
SS1G_04584
I
0.468
SETTUDRAFT_157792
Setosphaeria turcica
SETTUDRAFT_157792
I
0.496
SMAC_00615
Sordaria macrospora
SMAC_00615
I
0.539
SPBR_04745
Sporothrix brasiliensis
SPBR_04745
I
0.516
S40288_09735
Stachybotrys chartarum
S40288_09735
I
0.540
SNOG_03674
Stagonospora nodorum
SNOG_03674
I
0.543
THITE_2121767
Thielavia terrestris
THITE_2121767
I
0.544
VHEMI10573
Torrubiella hemipterigena
VHEMI10573
I
0.508
TRIATDRAFT_321166
Trichoderma atroviride
TRIATDRAFT_321166
I
0.491
TRIVIDRAFT_228694
Trichoderma virens
TRIVIDRAFT_228694
I
0.429
PV09_06887
Verruconis gallopava
PV09_06887
I
0.486
VDBG_04589
Verticillium albo atrum
VDBG_04589
I
0.574
VDBG_04589
Verticillium alfalfae
VDBG_04589
I
0.574
VDAG_09161
Verticillium dahliae
VDAG_09161
I
0.574
VDAG_04140
Verticillium dahliae
VDAG_04140
I
0.574