CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ALUE_0000448701
(
Ascaris lumbricoides
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
ALUE_0000448701
T335939_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0000448701-mRNA-1
Sox
33
97
PKRGRSSYMFWLAENRARLTQPGMSVVDVTRAAGAEWNTIEDKSKWEKLAAEDKKRYEKELVAYK
Links
Other
Sox
family TFs
Other
Ascaris lumbricoides
TFs
138 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_21637
Ancylostoma caninum
ANCCAN_21637
N
0.540
ANCCEY_10464
Ancylostoma ceylanicum
ANCCEY_10464
N
0.540
ANCDUO_11855
Ancylostoma duodenale
ANCDUO_11855
N
0.540
ACAC_0000857301
Angiostrongylus cantonensis
ACAC_0000857301
N
0.535
ACOC_0000653601
Angiostrongylus costaricensis
ACOC_0000653601
N
0.535
ACLA_030120
Aspergillus clavatus
CADACLAG00001678
N
0.000
AFUA_1G04550
Aspergillus fumigatus
CADAFUAG00009157
N
0.000
BGIBMGA005288
Bombyx mori
BGIBMGA005288
N
0.000
Bm6643
Brugia malayi
Bm6643
N
0.534
DICVIV_01337
Dictyocaulus viviparus
DICVIV_01337
N
0.540
nDi.2.2.2.g04713
Dirofilaria immitis
nDi.2.2.2.g04713
N
0.534
HCOI00417600
Haemonchus contortus
HCOI00417600
N
0.546
HPLM_0000803901
Haemonchus placei
HPLM_0000803901
N
0.546
HMEL015307
Heliconius melpomene
HMEL015307
N
0.000
HPBE_0002310801
Heligmosomoides bakeri
HPBE_0002310801
N
0.559
TTAC_0000692101
Hydatigera taeniaeformis
TTAC_0000692101
N
0.000
nLs.2.1.2.g02941
Litomosoides sigmodontis
nLs.2.1.2.g02941
N
0.546
NECAME_10840
Necator americanus
NECAME_10840
N
0.540
NFIA_020200
Neosartorya fischeri
CADNFIAG00000998
N
0.000
NBR_0001132501
Nippostrongylus brasiliensis
NBR_0001132501
N
0.540
Sakowv30021656m.g
Saccoglossus kowalevskii
Sakowv30021656m.g
N
0.000
SVUK_0001398701
Strongylus vulgaris
SVUK_0001398701
N
0.553
TASK_0000475801
Taenia asiatica
TASK_0000475801
N
0.000
TsM_000111500
Taenia solium
TsM_000111500
N
0.000
TELCIR_05217
Teladorsagia circumcincta
TELCIR_05217
N
0.546
TELCIR_22690
Teladorsagia circumcincta
TELCIR_22690
N
0.546