CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ALUE_0000998001
(
Ascaris lumbricoides
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
ALUE_0000998001
T335946_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0000998001-mRNA-1
Sox
3
71
KKRRSNGFMYFAEAMRATYEAENSANQLSTKRLMERANKDWKAMNDEQREKWIAECRRRKEEYQKHVYK
Links
Other
Sox
family TFs
Other
Ascaris lumbricoides
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_02206
Capronia coronata
A1O1_02206
N
A1O3_05646
Capronia epimyces
A1O3_05646
N
PV04_04498
Capronia semiimmersa
PV04_04498
N
Z519_08473
Cladophialophora bantiana
Z519_08473
N
PV07_05309
Cladophialophora immunda
PV07_05309
N
A1O7_04752
Cladophialophora yegresii
A1O7_04752
N
A1O9_09009
Exophiala aquamarina
A1O9_09009
N
HMPREF1120_03172
Exophiala dermatitidis
HMPREF1120_03172
N
PV10_04391
Exophiala mesophila
PV10_04391
N
PV06_06355
Exophiala oligosperma
PV06_06355
N
PV08_08642
Exophiala spinifera
PV08_08642
N
PV08_11643
Exophiala spinifera
PV08_11643
N
PV05_01571
Exophiala xenobiotica
PV05_01571
N
PV05_06232
Exophiala xenobiotica
PV05_06232
N
Z517_06419
Fonsecaea pedrosoi
Z517_06419
N
Z518_03126
Rhinocladiella mackenziei
Z518_03126
N