CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g07623
(
Litomosoides sigmodontis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
nLs.2.1.2.g07623
T336713_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t07623-RA
Sox
33
101
KKRSPNGFMYFAGARRAVYEAENPGAHLTAKKLVQRATRDWKLMSEDERQNWRSESRRRRDEYGRQVCQ
Links
Other
Sox
family TFs
Other
Litomosoides sigmodontis
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g09220
Acanthocheilonema viteae
nAv.1.0.1.g09220
N
0.626
ASIM_0000454201
Anisakis simplex
ASIM_0000454201
N
0.470
ALUE_0000998001
Ascaris lumbricoides
ALUE_0000998001
N
0.517
ASU_09388
Ascaris suum
ASU_09388
N
0.517
Bm8815
Brugia malayi
Bm8815
N
0.663
nDi.2.2.2.g09932
Dirofilaria immitis
nDi.2.2.2.g09932
N
0.670
LOAG_10530
Loa loa
LOAG_10530
N
0.650
nOo.2.0.1.g08720
Onchocerca ochengi
nOo.2.0.1.g08720
N
0.670
WBGene00249373
Onchocerca volvulus
WBGene00249373
N
0.670
PEQ_0000634001
Parascaris equorum
PEQ_0000634001
N
0.442
TCLT_0000719801
Thelazia callipaeda
TCLT_0000719801
N
0.609
WUBG_12231
Wuchereria bancrofti
WUBG_12231
N
0.636