CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
nLs.2.1.2.g07965
(
Litomosoides sigmodontis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
nLs.2.1.2.g07965
T336716_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t07965-RA
Sox
135
202
IRRPLNAYMIFTKQERKKLLALNPNMKMHEASRIMGEKWKNMNEKEKRQYFEASKQNRLDHKKALKDN
Links
Other
Sox
family TFs
Other
Litomosoides sigmodontis
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI005969
Acyrthosiphon pisum
ACYPI005969
I
ENSAMEG00000009640
Ailuropoda melanoleuca
ENSAMEG00000009640
I
ADIR003396
Anopheles dirus
ADIR003396
I
AFAF007369
Anopheles farauti
AFAF007369
I
AFUN003662
Anopheles funestus
AFUN003662
I
AMAM015265
Anopheles maculatus
AMAM015265
I
AMIN000247
Anopheles minimus
AMIN000247
I
ACEP18176
Atta cephalotes
ACEP18176
I
ENSBTAP00000023928-D1
Bos grunniens
ENSBTAP00000023928-D1
I
GLIS1
Bos taurus
ENSBTAG00000017986
I
GLIS1
Callithrix jacchus
ENSCJAG00000004690
I
GLIS1
Canis familiaris
ENSCAFG00000019088
I
ENSCSAG00000001292
Chlorocebus sabaeus
ENSCSAG00000001292
I
GLIS1
Dasypus novemcinctus
ENSDNOG00000046318
I
YQE_02130
Dendroctonus ponderosae
YQE_02130
I
Glis1
Dipodomys ordii
ENSDORG00000007361
I
GLIS1
Equus caballus
ENSECAG00000016349
I
GLIS1
Erinaceus europaeus
ENSEEUG00000010715
I
GLIS1
Felis catus
ENSFCAG00000005932
I
GLIS1
Gorilla gorilla
ENSGGOG00000009368
I
HHAL002153-PA
Halyomorpha halys
HHAL002153-PA
I
GLIS1
Homo sapiens
ENSG00000174332
D
GLIS1
Loxodonta africana
ENSLAFG00000000792
I
ENSMMUP00000015240
Macaca fascicularis
ENSMMUP00000015240
I
GLIS1
Macaca mulatta
ENSMMUG00000011608
I
ENSMPUG00000006276
Mustela putorius furo
ENSMPUG00000006276
I
Glis1
Mus musculus
ENSMUSG00000034762
I
Myotis_brandtii_Glis1_10020462
Myotis brandtii
Myotis_brandtii_Glis1_10020462
I
GLIS1
Myotis lucifugus
ENSMLUG00000016275
I
GLIS3
Ochotona princeps
ENSOPRG00000011679
I
GLIS1
Oryctolagus cuniculus
ENSOCUG00000016480
I
GLIS1
Otolemur garnettii
ENSOGAG00000034593
I
ENSPANG00000018679
Papio anubis
ENSPANG00000018679
I
ENSPPYG00000001332
Pongo abelii
ENSPPYG00000001332
I
GLIS1
Procavia capensis
ENSPCAG00000008477
I
GLIS1
Pteropus vampyrus
ENSPVAG00000000591
I
Glis1
Rattus norvegicus
ENSRNOG00000000138
I
SINV16941
Solenopsis invicta
SINV16941
I
GLIS1
Sus scrofa
ENSSSCG00000003846
I
ENSTRUG00000013888
Takifugu rubripes
ENSTRUG00000013888
I
GLIS3
Tupaia belangeri
ENSTBEG00000008004
I
GLIS1
Tursiops truncatus
ENSTTRG00000011772
I