scaffold98-EXSNAP2012.51 (Pristionchus exspectatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 scaffold98-EXSNAP2012.51 T336914_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold98-EXSNAP2012.51 Sox 32 96

Links

Other Sox family TFs
Other Pristionchus exspectatus TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g03971 Acanthocheilonema viteae nAv.1.0.1.g03971 N 0.504
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.545
nAv.1.0.1.g09805 Acanthocheilonema viteae nAv.1.0.1.g09805 N 0.416
ACYPI006576 Acyrthosiphon pisum ACYPI006576 I 0.420
ANCCAN_04253 Ancylostoma caninum ANCCAN_04253 N 0.535
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.563
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.591
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.591
ANCCAN_19939 Ancylostoma caninum ANCCAN_19939 N 0.436
ANCCAN_21637 Ancylostoma caninum ANCCAN_21637 N 0.510
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.591
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.535
ANCCEY_10464 Ancylostoma ceylanicum ANCCEY_10464 N 0.510
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.587
ANCDUO_11855 Ancylostoma duodenale ANCDUO_11855 N 0.510
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.591
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.535
ANCDUO_24269 Ancylostoma duodenale ANCDUO_24269 N 0.450
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.591
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N 0.547
ACAC_0000798501 Angiostrongylus cantonensis ACAC_0000798501 N 0.418
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.535
ACAC_0000857301 Angiostrongylus cantonensis ACAC_0000857301 N 0.505
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.535
ACOC_0000653601 Angiostrongylus costaricensis ACOC_0000653601 N 0.505
ACOC_0001190001 Angiostrongylus costaricensis ACOC_0001190001 N 0.418
ASIM_0000114801 Anisakis simplex ASIM_0000114801 N 0.436
ASIM_0000156001 Anisakis simplex ASIM_0000156001 N 0.479
ASIM_0001147101 Anisakis simplex ASIM_0001147101 N 0.487
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.571
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.564
ALUE_0000448701 Ascaris lumbricoides ALUE_0000448701 N 0.519
ALUE_0000605501 Ascaris lumbricoides ALUE_0000605501 N 0.506
ALUE_0001798401 Ascaris lumbricoides ALUE_0001798401 N 0.436
ASU_05752 Ascaris suum ASU_05752 N 0.519
ASU_05994 Ascaris suum ASU_05994 N 0.571
ASU_07820 Ascaris suum ASU_07820 N 0.506
ASU_09087 Ascaris suum ASU_09087 N 0.564
ASU_13985 Ascaris suum ASU_13985 N 0.436
BGIBMGA005288 Bombyx mori BGIBMGA005288 N 0.431
Bcin01g08840 Botrytis cinerea Bcin01g08840 I 0.430
Bm2524 Brugia malayi Bm2524 N 0.510
Bm6643 Brugia malayi Bm6643 N 0.510
Bm8632 Brugia malayi Bm8632 N 0.545
BTMF_0000229601 Brugia timori BTMF_0000229601 N 0.416
BXY_0253100 Bursaphelenchus xylophilus BXY_0253100 N 0.425
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.526
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.535
CBN25379 Caenorhabditis brenneri CBN25379 I 0.568
CBG04066 Caenorhabditis briggsae CBG04066 N 0.534
CBG09136 Caenorhabditis briggsae CBG09136 N 0.528
CBG20663 Caenorhabditis briggsae CBG20663 N 0.423
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.546
hmg-3 Caenorhabditis elegans WBGene00001973 N 0.464
hmg-4 Caenorhabditis elegans WBGene00001974 N 0.535
CJA04355 Caenorhabditis japonica CJA04355 N 0.554
CJA19030 Caenorhabditis japonica CJA19030 N 0.473
CRE03995 Caenorhabditis remanei CRE03995 N 0.518
CRE11852 Caenorhabditis remanei CRE11852 N 0.548
CapteG172235 Capitella teleta CapteG172235 I 0.473
csin108029 Clonorchis sinensis csin108029 N 0.417
DICVIV_01337 Dictyocaulus viviparus DICVIV_01337 N 0.510
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.535
nDi.2.2.2.g04713 Dirofilaria immitis nDi.2.2.2.g04713 N 0.519
nDi.2.2.2.g07477 Dirofilaria immitis nDi.2.2.2.g07477 N 0.504
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.545
DME_0000590001 Dracunculus medinensis DME_0000590001 N 0.452
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.558
GF11622 Drosophila ananassae FBgn0088662 I 0.454
GF12460 Drosophila ananassae FBgn0089497 N 0.420
GF13265 Drosophila ananassae FBgn0090297 N 0.429
GG19998 Drosophila erecta FBgn0112197 N 0.420
GG20749 Drosophila erecta FBgn0112936 I 0.454
GG22136 Drosophila erecta FBgn0114310 N 0.429
GH20784 Drosophila grimshawi FBgn0128247 I 0.454
GH21124 Drosophila grimshawi FBgn0128586 N 0.429
HmgD Drosophila melanogaster FBgn0004362 N 0.429
HmgZ Drosophila melanogaster FBgn0010228 I 0.454
Ssrp Drosophila melanogaster FBgn0010278 N 0.420
GI18728 Drosophila mojavensis FBgn0141467 N 0.429
GI18750 Drosophila mojavensis FBgn0141489 N 0.421
GI20867 Drosophila mojavensis FBgn0143601 I 0.454
GL11071 Drosophila persimilis FBgn0148681 N 0.447
GL16947 Drosophila persimilis FBgn0154551 N 0.429
GL17523 Drosophila persimilis FBgn0155126 I 0.463
GA14726 Drosophila pseudoobscura FBgn0074753 I 0.463
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.447
GA30453 Drosophila pseudoobscura FBgn0264590 N 0.429
GM13209 Drosophila sechellia FBgn0168140 N 0.428
GM15692 Drosophila sechellia FBgn0170608 I 0.454
GM15859 Drosophila sechellia FBgn0170775 N 0.429
GD11622 Drosophila simulans FBgn0183362 N 0.429
GD25013 Drosophila simulans FBgn0196325 N 0.420
GD25171 Drosophila simulans FBgn0196483 I 0.454
GJ20604 Drosophila virilis FBgn0207743 I 0.454
GJ21748 Drosophila virilis FBgn0208866 N 0.429
GK15658 Drosophila willistoni FBgn0217663 I 0.454
GK15924 Drosophila willistoni FBgn0217926 N 0.429
GK22092 Drosophila willistoni FBgn0224077 N 0.464
HmgZ Drosophila yakuba FBgn0068145 I 0.454
HmgD Drosophila yakuba FBgn0068146 N 0.429
GE11532 Drosophila yakuba FBgn0229332 N 0.420
ECANG7_00770 Echinococcus canadensis ECANG7_00770 N 0.488
EmuJ_000894800 Echinococcus multilocularis EmuJ_000894800 N 0.488
ECPE_0001309901 Echinostoma caproni ECPE_0001309901 N 0.452
ETH_00031100 Eimeria tenella ETH_00031100 I 0.417
EEL_0000629001 Elaeophora elaphi EEL_0000629001 N 0.416
EEL_0000829801 Elaeophora elaphi EEL_0000829801 N 0.504
EVEC_0000079801 Enterobius vermicularis EVEC_0000079801 N 0.564
EVEC_0000171701 Enterobius vermicularis EVEC_0000171701 N 0.514
GPUH_0000029001 Gongylonema pulchrum GPUH_0000029001 N 0.467
GPUH_0001272801 Gongylonema pulchrum GPUH_0001272801 N 0.504
GPUH_0001539601 Gongylonema pulchrum GPUH_0001539601 N 0.504
HCOI00417600 Haemonchus contortus HCOI00417600 N 0.515
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.562
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.535
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.562
HPLM_0000803901 Haemonchus placei HPLM_0000803901 N 0.515
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.535
HMEL015307 Heliconius melpomene HMEL015307 N 0.431
HPBE_0001796801 Heligmosomoides bakeri HPBE_0001796801 N 0.480
HPBE_0002310801 Heligmosomoides bakeri HPBE_0002310801 N 0.529
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.562
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.489
TTAC_0000692101 Hydatigera taeniaeformis TTAC_0000692101 N 0.486
HDID_0000239001 Hymenolepis diminuta HDID_0000239001 N 0.484
HmN_000028000 Hymenolepis microstoma HmN_000028000 N 0.541
HNAJ_0000793101 Hymenolepis nana HNAJ_0000793101 I 0.494
nLs.2.1.2.g02941 Litomosoides sigmodontis nLs.2.1.2.g02941 N 0.519
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.545
nLs.2.1.2.g07238 Litomosoides sigmodontis nLs.2.1.2.g07238 N 0.504
LOAG_04347 Loa loa LOAG_04347 N 0.504
LOAG_08062 Loa loa LOAG_08062 N 0.545
LOAG_14354 Loa loa LOAG_14354 N 0.445
LCUP016801 Lucilia cuprina LCUP016801 N 0.431
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.556
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.556
Minc03634 Meloidogyne incognita Minc03634 N 0.556
Minc04648 Meloidogyne incognita Minc04648 N 0.556
MDOA007633 Musca domestica MDOA007633 N 0.435
MDOA014797 Musca domestica MDOA014797 I 0.448
NECAME_10840 Necator americanus NECAME_10840 N 0.510
NECAME_16525 Necator americanus NECAME_16525 N 0.587
NECAME_17555 Necator americanus NECAME_17555 N 0.535
NECAME_17981 Necator americanus NECAME_17981 N 0.535
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.593
NBR_0001132501 Nippostrongylus brasiliensis NBR_0001132501 N 0.510
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.535
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.535
OFLC_0000496201 Onchocerca flexuosa OFLC_0000496201 N 0.416
OFLC_0000770701 Onchocerca flexuosa OFLC_0000770701 N 0.504
nOo.2.0.1.g01970 Onchocerca ochengi nOo.2.0.1.g01970 N 0.416
nOo.2.0.1.g02324 Onchocerca ochengi nOo.2.0.1.g02324 N 0.504
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.545
WBGene00237022 Onchocerca volvulus WBGene00237022 N 0.416
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.545
WBGene00244511 Onchocerca volvulus WBGene00244511 N 0.504
T265_15460 Opisthorchis viverrini T265_15460 N 0.417
OSTLU_18991 Ostreococcus lucimarinus OSTLU_18991 N 0.480
OSTLU_31946 Ostreococcus lucimarinus OSTLU_31946 I 0.494
gw1.6.1665.1 Ostreococcus RCC809 gw1.6.1665.1 I 0.499
PTRK_0000111400 Parastrongyloides trichosuri PTRK_0000111400 N 0.495
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.644
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.518
PHUM125270 Pediculus humanus PHUM125270 N 0.452
PPAI002522 Phlebotomus papatasi PPAI002522 I 0.461
estExt_fgenesh1_pg.C_2230007 Physcomitrella patens estExt_fgenesh1_pg.C_2230007 I 0.418
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.556
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.556
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.516
PPA02261 Pristionchus pacificus PPA02261 N 0.516
PPA06513 Pristionchus pacificus PPA06513 N 0.741
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.556
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N 0.573
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N 0.580
RSKR_0000269500 Rhabditophanes kr3021 RSKR_0000269500 N 0.594
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.514
RSKR_0000733200 Rhabditophanes kr3021 RSKR_0000733200 N 0.453
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N 0.639
SSLN_0000125101 Schistocephalus solidus SSLN_0000125101 N 0.465
SCUD_0000070901 Schistosoma curassoni SCUD_0000070901 N 0.439
A_01848 Schistosoma haematobium A_01848 N 0.439
Sjc_0035580 Schistosoma japonicum Sjc_0035580 N 0.439
Smp_148930 Schistosoma mansoni Smp_148930 N 0.439
SMTD_0001155301 Schistosoma mattheei SMTD_0001155301 N 0.439
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.589
L596_g20063 Steinernema carpocapsae L596_g20063 N 0.464
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.558
L596_g8199 Steinernema carpocapsae L596_g8199 N 0.503
L889_g16198 Steinernema feltiae L889_g16198 N 0.597
L889_g29516 Steinernema feltiae L889_g29516 N 0.565
L889_g6592 Steinernema feltiae L889_g6592 N 0.472
L889_g9094 Steinernema feltiae L889_g9094 N 0.556
L893_g23503 Steinernema glaseri L893_g23503 N 0.591
L893_g29974 Steinernema glaseri L893_g29974 N 0.558
L898_g23313 Steinernema monticolum L898_g23313 N 0.458
L898_g4830 Steinernema monticolum L898_g4830 N 0.558
L898_g7743 Steinernema monticolum L898_g7743 N 0.597
L892_g15959 Steinernema scapterisci L892_g15959 N 0.424
L892_g19058 Steinernema scapterisci L892_g19058 N 0.558
L892_g23618 Steinernema scapterisci L892_g23618 N 0.591
L892_g2503 Steinernema scapterisci L892_g2503 N 0.503
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.553
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.644
SPAL_0001421900 Strongyloides papillosus SPAL_0001421900 N 0.495
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.644
SSTP_0000790100 Strongyloides stercoralis SSTP_0000790100 N 0.488
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.553
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.553
SVE_0536900 Strongyloides venezuelensis SVE_0536900 N 0.495
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.644
SVUK_0001398701 Strongylus vulgaris SVUK_0001398701 N 0.510
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.587
SMUV_0000499601 Syphacia muris SMUV_0000499601 N 0.533
SMUV_0000634201 Syphacia muris SMUV_0000634201 N 0.417
TASK_0000475801 Taenia asiatica TASK_0000475801 N 0.486
TsM_000111500 Taenia solium TsM_000111500 N 0.459
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.535
TELCIR_05217 Teladorsagia circumcincta TELCIR_05217 N 0.515
TELCIR_22690 Teladorsagia circumcincta TELCIR_22690 N 0.515
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.460
TCLT_0000097001 Thelazia callipaeda TCLT_0000097001 N 0.498
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.564
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.571
TCNE_0001783901 Toxocara canis TCNE_0001783901 N 0.436
TriadG64155 Trichoplax adhaerens TriadG64155 I 0.429
WUBG_02390 Wuchereria bancrofti WUBG_02390 N 0.416
WUBG_03677 Wuchereria bancrofti WUBG_03677 N 0.504