CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMRZ_0000842001
(
Schistosoma margrebowiei
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SMRZ_0000842001
T336934_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMRZ_0000842001-mRNA-1
Sox
8
78
PKGAMNAYAAFLQSMRADHKKKHPNVTLDFKAFSKECSEQWKNLSAKEKKKFKDIAEKDKERYRCEMEHYE
SMRZ_0000842001-mRNA-1
Sox
96
162
PKKALSAFFLFCNDERPKVKSENPDWKVSEVAKELGKRWEHCKNKAKYESLAQVEKQRYEKAMQKYK
Links
Other
Sox
family TFs
Other
Schistosoma margrebowiei
TFs
179 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000000275
Ailuropoda melanoleuca
ENSAMEG00000000275
I
0.000
Alligator_sinensis_CCG021387.1
Alligator sinensis
Alligator_sinensis_CCG021387.1
I
0.000
ENSAPLG00000005928
Anas platyrhynchos
ENSAPLG00000005928
I
0.000
JUN
Anolis carolinensis
ENSACAG00000007057
I
0.000
Afo_R001077
Aptenodytes forsteri
Afo_R001077
I
0.000
ENSAMXG00000025987
Astyanax mexicanus
ENSAMXG00000025987
I
0.000
ENSP00000360266-D1
Bos grunniens
ENSP00000360266-D1
I
0.000
JUN
Bos taurus
ENSBTAG00000004037
I
0.000
Brh_R003731
Buceros rhinoceros
Brh_R003731
I
0.000
Aan_R000629
Calypte anna
Aan_R000629
I
0.000
JUN
Canis familiaris
ENSCAFG00000018897
I
0.000
JUN
Cavia porcellus
ENSCPOG00000026377
I
0.000
Cmyd_10020309
Chelonia mydas
Cmyd_10020309
I
0.000
ENSCSAG00000000149
Chlorocebus sabaeus
ENSCSAG00000000149
I
0.000
jun
Danio rerio
ENSDARG00000043531
I
0.000
JUN
Dasypus novemcinctus
ENSDNOG00000046358
I
0.000
JUN
Echinops telfairi
ENSETEG00000010613
I
0.000
ENSECAG00000024055
Equus caballus
ENSECAG00000024055
I
0.000
JUN
Felis catus
ENSFCAG00000024972
I
0.000
ENSFALG00000015113
Ficedula albicollis
ENSFALG00000015113
I
0.000
ENSGMOG00000019642
Gadus morhua
ENSGMOG00000019642
I
0.000
JUN
Gallus gallus
ENSGALG00000010870
I
0.000
Gfo_R010199
Geospiza fortis
Gfo_R010199
I
0.000
JUN
Gorilla gorilla
ENSGGOG00000003233
I
0.000
JUN
Homo sapiens
ENSG00000177606
D
0.000
ENSSTOG00000028549
Ictidomys tridecemlineatus
ENSSTOG00000028549
I
0.000
ENSLACG00000004975
Latimeria chalumnae
ENSLACG00000004975
I
0.000
ENSLOCG00000017745
Lepisosteus oculatus
ENSLOCG00000017745
I
0.000
JUN
Loxodonta africana
ENSLAFG00000012900
I
0.000
ENSP00000360266
Macaca fascicularis
ENSP00000360266
I
0.000
ENSMMUG00000032072
Macaca mulatta
ENSMMUG00000032072
I
0.000
JUN
Meleagris gallopavo
ENSMGAG00000011531
I
0.000
JUN
Monodelphis domestica
ENSMODG00000003321
I
0.000
ENSMPUG00000020182
Mustela putorius furo
ENSMPUG00000020182
I
0.000
Jun
Mus musculus
ENSMUSG00000052684
D
0.000
Myotis_brandtii_Jun_10020944
Myotis brandtii
Myotis_brandtii_Jun_10020944
I
0.000
ENSMLUG00000022840
Myotis lucifugus
ENSMLUG00000022840
I
0.000
Ogr14876
Ophisaurus gracilis
Ogr14876
I
0.000
ENSONIG00000020823
Oreochromis niloticus
ENSONIG00000020823
I
0.000
JUN
Oryctolagus cuniculus
ENSOCUG00000001212
I
0.000
jun
Oryzias latipes
ENSORLG00000014541
I
0.000
JUN
Otolemur garnettii
ENSOGAG00000005602
I
0.000
ENSOARG00000009999
Ovis aries
ENSOARG00000009999
I
0.000
JUN
Pan troglodytes
ENSPTRG00000039670
I
0.000
ENSPANG00000012317
Papio anubis
ENSPANG00000012317
I
0.000
ENSPSIG00000000515
Pelodiscus sinensis
ENSPSIG00000000515
I
0.000
ENSPFOG00000020898
Poecilia formosa
ENSPFOG00000020898
I
0.000
Pvit_08017
Pogona vitticeps
Pvit_08017
I
0.000
ENSPPYG00000001295
Pongo abelii
ENSPPYG00000001295
I
0.000
JUN
Pteropus vampyrus
ENSPVAG00000012803
I
0.000
Jun
Rattus norvegicus
ENSRNOG00000026293
I
0.000
ENSSSCG00000030839
Sus scrofa
ENSSSCG00000030839
I
0.000
JUN
Taeniopygia guttata
ENSTGUG00000009693
I
0.000
ENSTBEG00000015475
Tupaia belangeri
ENSTBEG00000015475
I
0.000
JUN
Tursiops truncatus
ENSTTRG00000011529
I
0.000
Tal_R003549
Tyto alba
Tal_R003549
I
0.000
jun.L
Xenopus laevis
XB-GENE-864843
I
0.000
XP_002931634
Xenopus tropicalis
XP_002931634
I
0.000
ENSXMAG00000019940
Xiphophorus maculatus
ENSXMAG00000019940
I
0.000