SROB_0000500401 (Schistosoma rodhaini)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SROB_0000500401 T337013_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0000500401-mRNA-1 Sox 8 78
SROB_0000500401-mRNA-1 Sox 96 162

Links

Other Sox family TFs
Other Schistosoma rodhaini TFs

176 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N 0.417
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.494
AAEL011380 Aedes aegypti AAEL011380 N 0.500
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.436
AALB006743 Anopheles albimanus AALB006743 N 0.500
AARA010318 Anopheles arabiensis AARA010318 N 0.500
AATE010886 Anopheles atroparvus AATE010886 N 0.458
AATE018776 Anopheles atroparvus AATE018776 N 0.500
ACUA021022 Anopheles culicifacies ACUA021022 N 0.500
ADAC001494 Anopheles darlingi ADAC001494 N 0.500
ADIR000367 Anopheles dirus ADIR000367 N 0.419
ADIR011701 Anopheles dirus ADIR011701 N 0.500
AEPI002924 Anopheles epiroticus AEPI002924 N 0.500
AFAF003948 Anopheles farauti AFAF003948 N 0.500
AFUN010134 Anopheles funestus AFUN010134 N 0.500
AGAP000005 Anopheles gambiae AGAP000005 N 0.500
AMAM015540 Anopheles maculatus AMAM015540 N 0.500
AMEC021909 Anopheles melas AMEC021909 N 0.500
AMEM017336 Anopheles merus AMEM017336 N 0.500
AMIN005344 Anopheles minimus AMIN005344 N 0.500
AQUA004962 Anopheles quadriannulatus AQUA004962 N 0.503
ASIS000124 Anopheles sinensis ASIS000124 N 0.500
ASIS009950 Anopheles sinensis ASIS009950 N 0.452
ASU_03902 Ascaris suum ASU_03902 N 0.417
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N 0.447
ACEP16613 Atta cephalotes ACEP16613 N 0.503
BGIBMGA001132 Bombyx mori BGIBMGA001132 N 0.463
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N 0.436
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.434
Bm4180 Brugia malayi Bm4180 N 0.417
ENSCJAG00000004401 Callithrix jacchus ENSCJAG00000004401 N 0.426
ENSCJAG00000007419 Callithrix jacchus ENSCJAG00000007419 N 0.418
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N 0.436
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.422
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.436
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N 0.503
CapteG158220 Capitella teleta CapteG158220 N 0.452
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.436
hmg1/2 Ciona intestinalis ENSCING00000004075 N 0.482
ENSCSAVG00000000341 Ciona savignyi ENSCSAVG00000000341 N 0.486
csin110255 Clonorchis sinensis csin110255 N 0.419
csin112095 Clonorchis sinensis csin112095 N 0.598
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.482
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.482
hmgb3b Danio rerio ENSDARG00000006408 N 0.435
hmgb2a Danio rerio ENSDARG00000029722 N 0.432
hmgb1a Danio rerio ENSDARG00000099175 N 0.429
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N 0.480
DAPPUDRAFT_306496 Daphnia pulex DAPPUDRAFT_306496 N 0.420
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.422
YQE_03203 Dendroctonus ponderosae YQE_03203 N 0.456
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.445
nDi.2.2.2.g04979 Dirofilaria immitis nDi.2.2.2.g04979 N 0.417
GF19115 Drosophila ananassae FBgn0096126 N 0.517
GG17955 Drosophila erecta FBgn0110175 N 0.517
GH12282 Drosophila grimshawi FBgn0119761 N 0.517
Dsp1 Drosophila melanogaster FBgn0011764 N 0.517
GI10980 Drosophila mojavensis FBgn0133743 N 0.517
GA11488 Drosophila pseudoobscura FBgn0071539 N 0.517
GD17278 Drosophila simulans FBgn0188840 N 0.517
GJ19445 Drosophila virilis FBgn0206588 N 0.517
GK25058 Drosophila willistoni FBgn0227017 N 0.517
GE17263 Drosophila yakuba FBgn0234741 N 0.517
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.456
ECANG7_07075 Echinococcus canadensis ECANG7_07075 N 0.444
EmuJ_000941400 Echinococcus multilocularis EmuJ_000941400 N 0.444
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.475
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N 0.417
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N 0.417
D915_00818 Fasciola hepatica D915_00818 N 0.498
D915_15256 Fasciola hepatica D915_15256 N 0.416
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N 0.416
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N 0.440
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.436
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N 0.503
HMEL007340 Heliconius melpomene HMEL007340 N 0.483
HelroG157878 Helobdella robusta HelroG157878 N 0.415
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.434
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.456
TTAC_0000939701 Hydatigera taeniaeformis TTAC_0000939701 N 0.420
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.453
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.453
HmN_000761000 Hymenolepis microstoma HmN_000761000 N 0.466
HNAJ_0000227501 Hymenolepis nana HNAJ_0000227501 N 0.447
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.453
ISCW017350 Ixodes scapularis ISCW017350 N 0.461
LDEC006842 Leptinotarsa decemlineata LDEC006842 N 0.470
LOAG_04936 Loa loa LOAG_04936 N 0.417
LCUP007363 Lucilia cuprina LCUP007363 N 0.517
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.471
MCOS_0000588101 Mesocestoides corti MCOS_0000588101 N 0.475
MDOA008812 Musca domestica MDOA008812 N 0.502
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.436
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.422
Myotis_brandtii_HMGB3_10026974 Myotis brandtii Myotis_brandtii_HMGB3_10026974 N 0.419
NV15664 Nasonia vitripennis NV15664 N 0.503
NECAME_09126 Necator americanus NECAME_09126 N 0.436
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.436
WBGene00245261 Onchocerca volvulus WBGene00245261 N 0.417
T265_10726 Opisthorchis viverrini T265_10726 N 0.618
T265_12733 Opisthorchis viverrini T265_12733 N 0.485
T265_14643 Opisthorchis viverrini T265_14643 N 0.419
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.419
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.422
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N 0.436
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.422
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.422
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.422
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.422
ENSPANG00000010595 Papio anubis ENSPANG00000010595 N 0.417
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N 0.417
PHUM006290 Pediculus humanus PHUM006290 N 0.456
ENSPFOG00000004533 Poecilia formosa ENSPFOG00000004533 N 0.428
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.434
scaffold580-EXSNAP2012.5 Pristionchus exspectatus scaffold580-EXSNAP2012.5 N 0.429
Ppa-hmg-1.2 Pristionchus pacificus PPA02361 N 0.429
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N 0.458
PXEA_0000637001 Protopolystoma xenopodis PXEA_0000637001 N 0.459
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.491
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.428
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.428
AC127605.1 Rattus norvegicus ENSRNOG00000033156 N 0.431
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.428
LOC103694516 Rattus norvegicus ENSRNOG00000049646 N 0.419
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.436
LOC103694517 Rattus norvegicus ENSRNOG00000052269 N 0.418
RGD1561558 Rattus norvegicus ENSRNOG00000053609 N 0.419
RGD1566225 Rattus norvegicus ENSRNOG00000055742 N 0.419
LOC681067 Rattus norvegicus ENSRNOG00000057013 N 0.419
LOC691030 Rattus norvegicus ENSRNOG00000057926 N 0.419
RGD1560585 Rattus norvegicus ENSRNOG00000060534 N 0.419
RPRC006379 Rhodnius prolixus RPRC006379 N 0.420
nRc.2.0.1.g43473 Romanomermis culicivorax nRc.2.0.1.g43473 N 0.424
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.505
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.445
SSLN_0001302101 Schistocephalus solidus SSLN_0001302101 N 0.476
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.478
SCUD_0001034301 Schistosoma curassoni SCUD_0001034301 N 0.722
A_00070 Schistosoma haematobium A_00070 N 0.722
Sjc_0031360 Schistosoma japonicum Sjc_0031360 N 0.458
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N 0.693
Smp_000980 Schistosoma mansoni Smp_000980 N 0.478
Smp_100090 Schistosoma mansoni Smp_100090 N 0.741
SMRZ_0000842001 Schistosoma margrebowiei SMRZ_0000842001 N 0.722
SMTD_0001017101 Schistosoma mattheei SMTD_0001017101 N 0.722
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.478
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.478
SMU15002907 Schmidtea mediterranea SMU15002907 N 0.484
SMU15013231 Schmidtea mediterranea SMU15013231 N 0.469
SMU15016767 Schmidtea mediterranea SMU15016767 N 0.447
SMU15027649 Schmidtea mediterranea SMU15027649 N 0.471
SMU15030256 Schmidtea mediterranea SMU15030256 N 0.420
SBAD_0000405201 Soboliphyme baturini SBAD_0000405201 N 0.418
SINV22586 Solenopsis invicta SINV22586 N 0.503
SMAR013695 Strigamia maritima SMAR013695 N 0.491
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.440
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.419
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.436
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.436
SMUV_0000232601 Syphacia muris SMUV_0000232601 N 0.420
TASK_0000795701 Taenia asiatica TASK_0000795701 N 0.461
TsM_000115400 Taenia solium TsM_000115400 N 0.475
TsM_000746700 Taenia solium TsM_000746700 N 0.461
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.418
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.436
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.483
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.480
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N 0.417
TCNE_0000567001 Toxocara canis TCNE_0000567001 N 0.417
D917_01254 Trichinella nativa D917_01254 N 0.426
EFV57410 Trichinella spiralis EFV57410 N 0.426
TRE_0000690301 Trichobilharzia regenti TRE_0000690301 N 0.648
D918_07195 Trichuris suis D918_07195 N 0.418
TTRE_0000338301 Trichuris trichiura TTRE_0000338301 N 0.422
AAH44009 Xenopus laevis AAH44009 N 0.426
hmgb2.S Xenopus laevis XB-GENE-1000251 N 0.422