CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Afo_R011286
(
Aptenodytes forsteri
)
STAT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02864 (STAT_bind)
IPR013801
Afo_R011286
T337802_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
STAT5B
M09417_2.00
Homo sapiens
NNTTCYMRGAAN
NTTCYKRGAANN
Misc
Kulakovskiy et al.(2013)
STA5B_HUMAN.H11MO.0.A
0.955
0.955
STAT5B
M11371_2.00
Homo sapiens
NDWTTCYNGGAAWHN
NDWTTCCNRGAAWHN
Transfac
Matys et al.(2006)
V$STAT5B_01
0.955
0.955
Stat5b
M09421_2.00
Mus musculus
NNTTCYMRGAAN
NTTCYKRGAANN
Misc
Kulakovskiy et al.(2013)
STA5B_MOUSE.H11MO.0.A
0.951
0.951
Stat5a
M09420_2.00
Mus musculus
TTCYMRGAAN
NTTCYKRGAA
Misc
Kulakovskiy et al.(2013)
STA5A_MOUSE.H11MO.0.A
0.942
0.942
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Afo_R011286
STAT
338
588
FIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQVKATIISEQQAKALLKNESTRNESSGEILNNCCVMEYHQATGTLSAHFRNMSLKRIKRSDRRGAESVTEEKFTILFESQFSVGGNELVFQVKTLSLPVVVIVHGSQDNNATATVLWDNAFAEPGRVPFAVPDKVQWPQLCEALNMKFKAEVQSSRGLTKENLVFLAQKLFNSTSSHLEDYSSTTVSWSQFNRENLPGRNYTFWQWFDGVMEVLK
Links
Other
STAT
family TFs
Other
Aptenodytes forsteri
TFs
105 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_08467
Ancylostoma caninum
ANCCAN_08467
N
ANCDUO_06017
Ancylostoma duodenale
ANCDUO_06017
N
ACAC_0000716401
Angiostrongylus cantonensis
ACAC_0000716401
N
DICVIV_00533
Dictyocaulus viviparus
DICVIV_00533
N
DME_0000341901
Dracunculus medinensis
DME_0000341901
N
HCOI01748400
Haemonchus contortus
HCOI01748400
N
HPLM_0001935601
Haemonchus placei
HPLM_0001935601
N
HPBE_0000472101
Heligmosomoides bakeri
HPBE_0000472101
N
NECAME_03833
Necator americanus
NECAME_03833
N
OESDEN_21180
Oesophagostomum dentatum
OESDEN_21180
N
SVUK_0001263701
Strongylus vulgaris
SVUK_0001263701
N
TELCIR_02972
Teladorsagia circumcincta
TELCIR_02972
N