CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG021131.1
(
Alligator sinensis
)
STAT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02864 (STAT_bind)
IPR013801
Alligator_sinensis_CCG021131.1
T337807_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Stat5b
M09421_2.00
Mus musculus
NNTTCYMRGAAN
NTTCYKRGAANN
Misc
Kulakovskiy et al.(2013)
STA5B_MOUSE.H11MO.0.A
0.967
0.967
STAT5B
M09417_2.00
Homo sapiens
NNTTCYMRGAAN
NTTCYKRGAANN
Misc
Kulakovskiy et al.(2013)
STA5B_HUMAN.H11MO.0.A
0.959
0.959
Stat5a
M09420_2.00
Mus musculus
TTCYMRGAAN
NTTCYKRGAA
Misc
Kulakovskiy et al.(2013)
STA5A_MOUSE.H11MO.0.A
0.959
0.959
STAT5B
M11371_2.00
Homo sapiens
NDWTTCYNGGAAWHN
NDWTTCCNRGAAWHN
Transfac
Matys et al.(2006)
V$STAT5B_01
0.959
0.959
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG021131.1
STAT
329
579
FIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQVKATIISEQQAKALLKNESTRNESSGEILNNCCVMEYHQATGTLSAHFRNMSLKRIKRSDRRGAESVTEEKFTILFESQFSVGGNELVFQVKTLSLPVVVIVHGSQDNNATATVLWDNAFAEPGRVPFAVPDKVLWPQLCEALNMKFKAEVQSNRGLTKENLVFLAQKLFNSTSNHLEDYNSMTVSWSQFNRENLPGRNYTFWQWFDGVMEVLK
Links
Other
STAT
family TFs
Other
Alligator sinensis
TFs
108 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TVAG_549820
Trichomonas vaginalis
TVAG_549820
N
TVAG_440000
Trichomonas vaginalis
TVAG_440000
N
TVAG_462160
Trichomonas vaginalis
TVAG_462160
N
TVAG_488180
Trichomonas vaginalis
TVAG_488180
N
TVAG_501380
Trichomonas vaginalis
TVAG_501380
N
TVAG_519820
Trichomonas vaginalis
TVAG_519820
N
TVAG_533990
Trichomonas vaginalis
TVAG_533990
N
TVAG_536730
Trichomonas vaginalis
TVAG_536730
N
TVAG_538650
Trichomonas vaginalis
TVAG_538650
N
TVAG_539410
Trichomonas vaginalis
TVAG_539410
N
TVAG_430360
Trichomonas vaginalis
TVAG_430360
N
TVAG_550950
Trichomonas vaginalis
TVAG_550950
N
TVAG_557420
Trichomonas vaginalis
TVAG_557420
N
TVAG_561010
Trichomonas vaginalis
TVAG_561010
N
TVAG_582880
Trichomonas vaginalis
TVAG_582880
N
TVAG_586030
Trichomonas vaginalis
TVAG_586030
N
TVAG_586800
Trichomonas vaginalis
TVAG_586800
N
TVAG_587380
Trichomonas vaginalis
TVAG_587380
N
TVAG_598440
Trichomonas vaginalis
TVAG_598440
N
TVAG_603120
Trichomonas vaginalis
TVAG_603120
N
TVAG_181410
Trichomonas vaginalis
TVAG_181410
N
TVAG_031350
Trichomonas vaginalis
TVAG_031350
N
TVAG_031380
Trichomonas vaginalis
TVAG_031380
N
TVAG_072840
Trichomonas vaginalis
TVAG_072840
N
TVAG_082330
Trichomonas vaginalis
TVAG_082330
N
TVAG_086690
Trichomonas vaginalis
TVAG_086690
N
TVAG_088420
Trichomonas vaginalis
TVAG_088420
N
TVAG_096530
Trichomonas vaginalis
TVAG_096530
N
TVAG_125920
Trichomonas vaginalis
TVAG_125920
N
TVAG_166050
Trichomonas vaginalis
TVAG_166050
N
TVAG_017720
Trichomonas vaginalis
TVAG_017720
N
TVAG_191300
Trichomonas vaginalis
TVAG_191300
N
TVAG_206490
Trichomonas vaginalis
TVAG_206490
N
TVAG_216600
Trichomonas vaginalis
TVAG_216600
N
TVAG_223270
Trichomonas vaginalis
TVAG_223270
N
TVAG_229040
Trichomonas vaginalis
TVAG_229040
N
TVAG_285330
Trichomonas vaginalis
TVAG_285330
N
TVAG_341860
Trichomonas vaginalis
TVAG_341860
N
TVAG_406160
Trichomonas vaginalis
TVAG_406160
N
TVAG_413790
Trichomonas vaginalis
TVAG_413790
N