CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ogr09155
(
Ophisaurus gracilis
)
STAT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02864 (STAT_bind)
IPR013801
Ogr09155
T337851_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
STAT5B
M09417_2.00
Homo sapiens
NNTTCYMRGAAN
NTTCYKRGAANN
Misc
Kulakovskiy et al.(2013)
STA5B_HUMAN.H11MO.0.A
0.930
0.930
Stat5b
M09421_2.00
Mus musculus
NNTTCYMRGAAN
NTTCYKRGAANN
Misc
Kulakovskiy et al.(2013)
STA5B_MOUSE.H11MO.0.A
0.930
0.930
STAT5B
M11371_2.00
Homo sapiens
NDWTTCYNGGAAWHN
NDWTTCCNRGAAWHN
Transfac
Matys et al.(2006)
V$STAT5B_01
0.930
0.930
Stat5a
M09420_2.00
Mus musculus
TTCYMRGAAN
NTTCYKRGAA
Misc
Kulakovskiy et al.(2013)
STA5A_MOUSE.H11MO.0.A
0.922
0.922
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr09155
STAT
266
516
FIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQVKATIISEQQAKALLKNESTRNESSGDILNNSCVMEYHQATGTLSAHFRNMSLKRIKRSDRRGAESVTEEKFTILFESQFSVGGNELVFQVKTLSLPVVVIVHGSQDNNATATVLWDNAFAEPGRVPFAVPDKVMWSQLCEALNMKFKSEVQSSRGLTKENLLFLAQKLFNSSINHLEDYNGMPVSWAQFNRENLPGRNYTFWQWFDGVMEVLK
Links
Other
STAT
family TFs
Other
Ophisaurus gracilis
TFs
106 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_00072
Aegilops tauschii
F775_00072
N
F775_03070
Aegilops tauschii
F775_03070
I
F775_23221
Aegilops tauschii
F775_23221
N
F775_23301
Aegilops tauschii
F775_23301
N
F775_23426
Aegilops tauschii
F775_23426
N
MLOC_10707
Hordeum vulgare
MLOC_10707
N
MLOC_51337
Hordeum vulgare
MLOC_51337
N
BGIOSGA021814
Oryza indica
BGIOSGA021814
N
OPUNC06G04640
Oryza punctata
OPUNC06G04640
I
Pavir.Ca01211
Panicum virgatum
Pavir.Ca01211
N
Pavir.Ca01212
Panicum virgatum
Pavir.Ca01212
N
Pavir.J00200
Panicum virgatum
Pavir.J00200
N
Pavir.J00203
Panicum virgatum
Pavir.J00203
N
Traes_1AL_FF8F7A939
Triticum aestivum
Traes_1AL_FF8F7A939
N
Traes_7AS_6A126F5F5
Triticum aestivum
Traes_7AS_6A126F5F5
N
TRIUR3_31433
Triticum urartu
TRIUR3_31433
N
TRIUR3_33433
Triticum urartu
TRIUR3_33433
N