CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AAEL018165
(
Aedes aegypti
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
AAEL018165
T339250_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
org-1
M03988_2.00
Drosophila melanogaster
DRGTGTBAD
HTVACACYH
SELEX
Nitta et al.(2015)
org-1_1
0.750
0.742
org-1
M03989_2.00
Drosophila melanogaster
TRACACYTARGTGTGA
TCACACYTARGTGTYA
SELEX
Nitta et al.(2015)
org-1_2
0.750
0.742
Tbx1
M00832_2.00
Mus musculus
NRGTGTGAANN
NNTTCACACYN
PBM
Weirauch et al.(2013)
pTH3822
0.744
0.703
TBX1
M03570_2.00
Homo sapiens
ARGTGTKAAAWHARGTGTGA
TCACACYTDWTTTMACACYT
SELEX
Jolma et al.(2013)
TBX1_1
0.744
0.703
TBX1
M03571_2.00
Homo sapiens
AGGTGTGAWWTTCACACCT
AGGTGTGAAWWTCACACCT
SELEX
Jolma et al.(2013)
TBX1_2
0.744
0.703
TBX1
M03572_2.00
Homo sapiens
AGGTGTGA
TCACACCT
SELEX
Jolma et al.(2013)
TBX1_3
0.744
0.703
TBX1
M03573_2.00
Homo sapiens
YYTCACACMTYWRAGGTGTGAAA
TTTCACACCTYWRAKGTGTGARR
SELEX
Jolma et al.(2013)
TBX1_4
0.744
0.703
TBX1
M03574_2.00
Homo sapiens
YTCACACCTDKAGGTGTGAA
TTCACACCTMHAGGTGTGAR
SELEX
Jolma et al.(2013)
TBX1_5
0.744
0.703
TBX1
M05821_2.00
Homo sapiens
BDRGGTGTGARV
BYTCACACCYHV
SELEX
Yin et al.(2017)
TBX1_eDBD_HT-SELEX
0.744
0.703
Tbx1
M11386_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX1_07
0.744
0.703
TBX1
M05822_2.00
Homo sapiens
DNWGGTGTGARN
NYTCACACCWNH
SELEX
Yin et al.(2017)
TBX1_eDBD_Methyl-HT-SELEX
0.744
0.703
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAEL018165-PA
T-box
139
334
VMLEGKHLWDKFHEQGTEMIVTKAGRRMFPTFQVKVVGLELTAEYLMIMDFVPLDDKRYRYAFHTSSWVVAGKADPISPPRISVHQDSPATGATWMKQTISFDKLKLTNNQLDDNGHIILNSMHRYQPRLHVCHFSRSSAVNNNNHRGPIKTEKDMLTYRTFVFPETSFTAVTAYQNQRVTQLKIVSNPFAKGFRD
Links
Other
T-box
family TFs
Other
Aedes aegypti
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_004_00791
Aquilegia coerulea
Aquca_004_00791
I
Aquca_009_00172
Aquilegia coerulea
Aquca_009_00172
I
Aquca_009_00424
Aquilegia coerulea
Aquca_009_00424
I
TGA6
Arabidopsis lyrata
fgenesh2_kg.3__1288__AT3G12250.4
I
OBF5
Arabidopsis lyrata
fgenesh2_kg.6__648__AT5G06960.1
I
TGA6
Arabidopsis thaliana
AT3G12250
D
TGA2
Arabidopsis thaliana
AT5G06950
D
TGA5
Arabidopsis thaliana
AT5G06960
D
Bostr.13129s0278
Boechera stricta
Bostr.13129s0278
I
Bostr.13129s0279
Boechera stricta
Bostr.13129s0279
I
Bostr.3640s0002
Boechera stricta
Bostr.3640s0002
I
BRADI2G10830
Brachypodium distachyon
BRADI2G10830
I
Bo1g139470
Brassica oleracea
Bo1g139470
I
Bo2g007460
Brassica oleracea
Bo2g007460
I
Bo3g064830
Brassica oleracea
Bo3g064830
I
Bo5g133550
Brassica oleracea
Bo5g133550
I
Bo9g175710
Brassica oleracea
Bo9g175710
I
Bra001443
Brassica rapa
Bra001443
I
Bra009241
Brassica rapa
Bra009241
I
Bra028713
Brassica rapa
Bra028713
I
Bra034767
Brassica rapa
Bra034767
I
Bra038705
Brassica rapa
Bra038705
I
PK09021.1
Cannabis sativa
PK09021.1
D
PK13754.1
Cannabis sativa
PK13754.1
I
PK21698.1
Cannabis sativa
PK21698.1
I
Cagra.0430s0055
Capsella grandiflora
Cagra.0430s0055
I
Cagra.16209s0003
Capsella grandiflora
Cagra.16209s0003
I
Cagra.16209s0004
Capsella grandiflora
Cagra.16209s0004
I
Carubv10001409m.g
Capsella rubella
Carubv10001409m.g
I
Carubv10001413m.g
Capsella rubella
Carubv10001413m.g
I
evm.TU.supercontig_1.202
Carica papaya
evm.TU.supercontig_1.202
I
evm.TU.supercontig_5.165
Carica papaya
evm.TU.supercontig_5.165
I
evm.TU.supercontig_847.1
Carica papaya
evm.TU.supercontig_847.1
I
evm.TU.supercontig_85.93
Carica papaya
evm.TU.supercontig_85.93
I
Ca_07170
Cicer arietinum
Ca_07170
I
Ca_10901
Cicer arietinum
Ca_10901
I
Ca_17971
Cicer arietinum
Ca_17971
I
Cla002918
Citrullus lanatus
Cla002918
I
Cla010092
Citrullus lanatus
Cla010092
I
Cla017796
Citrullus lanatus
Cla017796
I
Cla022393
Citrullus lanatus
Cla022393
I
Ciclev10001081m.g
Citrus clementina
Ciclev10001081m.g
I
Ciclev10005080m.g
Citrus clementina
Ciclev10005080m.g
I
Ciclev10031361m.g
Citrus clementina
Ciclev10031361m.g
I
orange1.1g015258m.g
Citrus sinensis
orange1.1g015258m.g
I
orange1.1g038233m.g
Citrus sinensis
orange1.1g038233m.g
I
orange1.1g045786m.g
Citrus sinensis
orange1.1g045786m.g
I
Cucsa.005120
Cucumis sativus
Cucsa.005120
I
Cucsa.242870
Cucumis sativus
Cucsa.242870
I
Cucsa.307820
Cucumis sativus
Cucsa.307820
I
Cucsa.337740
Cucumis sativus
Cucsa.337740
I
Eucgr.A02240
Eucalyptus grandis
Eucgr.A02240
I
Eucgr.G03217
Eucalyptus grandis
Eucgr.G03217
I
Eucgr.K01643
Eucalyptus grandis
Eucgr.K01643
I
Thhalv10014082m.g
Eutrema salsugineum
Thhalv10014082m.g
I
Thhalv10021187m.g
Eutrema salsugineum
Thhalv10021187m.g
I
gene00517-v1.0-hybrid
Fragaria vesca
gene00517-v1.0-hybrid
I
gene21882-v1.0-hybrid
Fragaria vesca
gene21882-v1.0-hybrid
I
GLYMA02G10833
Glycine max
GLYMA02G10833
I
GLYMA03G28320
Glycine max
GLYMA03G28320
I
GLYMA13G26280
Glycine max
GLYMA13G26280
I
GLYMA15G37220
Glycine max
GLYMA15G37220
I
GLYMA19G31050
Glycine max
GLYMA19G31050
I
GLYMA20G39050
Glycine max
GLYMA20G39050
I
Gorai.001G122100
Gossypium raimondii
Gorai.001G122100
I
Gorai.002G228200
Gossypium raimondii
Gorai.002G228200
I
Gorai.006G141000
Gossypium raimondii
Gorai.006G141000
I
Gorai.007G352600
Gossypium raimondii
Gorai.007G352600
I
Gorai.008G185000
Gossypium raimondii
Gorai.008G185000
I
Gorai.011G217200
Gossypium raimondii
Gorai.011G217200
I
Gorai.013G001700
Gossypium raimondii
Gorai.013G001700
I
Gorai.013G081100
Gossypium raimondii
Gorai.013G081100
I
LPERR01G10700
Leersia perrieri
LPERR01G10700
I
LPERR05G17110
Leersia perrieri
LPERR05G17110
I
Lus10008658.g
Linum usitatissimum
Lus10008658.g
I
Lus10018009.g
Linum usitatissimum
Lus10018009.g
N
Lus10024140.g
Linum usitatissimum
Lus10024140.g
I
Lus10026166.g
Linum usitatissimum
Lus10026166.g
I
Lus10042005.g
Linum usitatissimum
Lus10042005.g
N
chr1.CM0009.80.nd
Lotus japonicus
chr1.CM0009.80.nd
I
MDP0000262210
Malus domestica
MDP0000262210
I
MDP0000300532
Malus domestica
MDP0000300532
I
MDP0000307943
Malus domestica
MDP0000307943
I
MDP0000320322
Malus domestica
MDP0000320322
I
MDP0000320524
Malus domestica
MDP0000320524
I
MDP0000536881
Malus domestica
MDP0000536881
I
cassava1426.valid.m1
Manihot esculenta
cassava1426.valid.m1
I
cassava1427.valid.m1
Manihot esculenta
cassava1427.valid.m1
I
cassava22236.valid.m1
Manihot esculenta
cassava22236.valid.m1
I
cassava22237.valid.m1
Manihot esculenta
cassava22237.valid.m1
I
cassava39253.m1
Manihot esculenta
cassava39253.m1
I
cassava6928.valid.m1
Manihot esculenta
cassava6928.valid.m1
I
MTR_7g089800
Medicago truncatula
MTR_7g089800
I
MTR_8g040120
Medicago truncatula
MTR_8g040120
I
mgf005858m
Mimulus guttatus
mgf005858m
I
mgf025345m
Mimulus guttatus
mgf025345m
I
GSMUA_Achr10G00340_001
Musa acuminata
GSMUA_Achr10G00340_001
I
GSMUA_Achr11G25140_001
Musa acuminata
GSMUA_Achr11G25140_001
I
GSMUA_Achr3G11150_001
Musa acuminata
GSMUA_Achr3G11150_001
I
GSMUA_Achr3G25020_001
Musa acuminata
GSMUA_Achr3G25020_001
I
GSMUA_Achr8G05800_001
Musa acuminata
GSMUA_Achr8G05800_001
I
OBART01G11380
Oryza barthii
OBART01G11380
I
OBART05G21230
Oryza barthii
OBART05G21230
I
OB01G21470
Oryza brachyantha
OB01G21470
I
OB01G43330
Oryza brachyantha
OB01G43330
I
OGLUM05G22440
Oryza glumaepatula
OGLUM05G22440
I
BGIOSGA003265
Oryza indica
BGIOSGA003265
I
OLONG_003165
Oryza longistaminata
OLONG_003165
I
ONIVA01G13810
Oryza nivara
ONIVA01G13810
I
ONIVA05G21900
Oryza nivara
ONIVA05G21900
I
OPUNC01G11270
Oryza punctata
OPUNC01G11270
I
OPUNC05G18920
Oryza punctata
OPUNC05G18920
I
ORUFI01G12420
Oryza rufipogon
ORUFI01G12420
I
TGA2.3
Oryza sativa
OS01G0279900
I
OS05G0492000
Oryza sativa
OS05G0492000
I
Pavir.Eb01160
Panicum virgatum
Pavir.Eb01160
I
Pavir.Eb03507
Panicum virgatum
Pavir.Eb03507
I
POPTR_0001s06700
Populus trichocarpa
POPTR_0001s06700
I
POPTR_0006s03720
Populus trichocarpa
POPTR_0006s03720
I
POPTR_0006s05770
Populus trichocarpa
POPTR_0006s05770
I
PAN
Populus trichocarpa
POPTR_0008s11710
I
POPTR_0016s03590
Populus trichocarpa
POPTR_0016s03590
I
POPTR_0016s04970
Populus trichocarpa
POPTR_0016s04970
I
Pm016643
Prunus mume
Pm016643
I
Pm025995
Prunus mume
Pm025995
I
Pm028917
Prunus mume
Pm028917
I
PRUPE_ppa003825mg
Prunus persica
PRUPE_ppa003825mg
I
PRUPE_ppa005279mg
Prunus persica
PRUPE_ppa005279mg
I
29216.m000249
Ricinus communis
29216.m000249
I
30131.m007163
Ricinus communis
30131.m007163
I
SapurV1A.0079s0330
Salix purpurea
SapurV1A.0079s0330
I
SapurV1A.0189s0240
Salix purpurea
SapurV1A.0189s0240
I
SapurV1A.0196s0260
Salix purpurea
SapurV1A.0196s0260
I
SapurV1A.1761s0020
Salix purpurea
SapurV1A.1761s0020
I
Si001292m.g
Setaria italica
Si001292m.g
I
Si002195m.g
Setaria italica
Si002195m.g
I
Solyc11g064950.1
Solanum lycopersicum
Solyc11g064950.1
I
PGSC0003DMG400009449
Solanum tuberosum
PGSC0003DMG400009449
I
Sb03g006790
Sorghum bicolor
Sb03g006790
I
Sb03g037560
Sorghum bicolor
Sb03g037560
I
TCM_011845
Theobroma cacao
TCM_011845
I
TCM_023491
Theobroma cacao
TCM_023491
I
TCM_023492
Theobroma cacao
TCM_023492
I
TCM_024862
Theobroma cacao
TCM_024862
I
HBP1B_WHEAT
Triticum aestivum
HBP1B_WHEAT
D
TRAES3BF003000030CFD_g
Triticum aestivum
TRAES3BF003000030CFD_g
I
PAN
Vitis vinifera
VIT_01s0011g03230
I
VIT_08s0007g05170
Vitis vinifera
VIT_08s0007g05170
I
TGA10
Vitis vinifera
VIT_08s0007g06160
I
VIT_13s0084g00660
Vitis vinifera
VIT_13s0084g00660
I
VIT_18s0001g04470
Vitis vinifera
VIT_18s0001g04470
I
GRMZM2G019907
Zea mays
GRMZM2G019907
I
GRMZM2G030280
Zea mays
GRMZM2G030280
I
GRMZM2G125243
Zea mays
GRMZM2G125243
I