tbx22 (Danio rerio)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSDARG00000091748 T339776_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TBX22
M11383_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX22_01 		0.820 0.742
TBX18
M05797_2.00 		Homo sapiens
DDAGGTGTGARV
BYTCACACCTHH		 SELEX
Yin et al.(2017)
TBX18_eDBD_HT-SELEX 		0.810 0.725
TBX18
M11380_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX18_01 		0.810 0.725
TBX18
M05798_2.00 		Homo sapiens
NDAGGYGTGAAN
NTTCACRCCTHN		 SELEX
Yin et al.(2017)
TBX18_eDBD_Methyl-HT-SELEX 		0.810 0.725
TBX15
M03554_2.00 		Homo sapiens
AGGTGTGAAATTCACACCT
AGGTGTGAATTTCACACCT		 SELEX
Jolma et al.(2013)
TBX15_1 		0.809 0.703
TBX15
M03555_2.00 		Homo sapiens
AGGTGTGA
TCACACCT		 SELEX
Jolma et al.(2013)
TBX15_2 		0.809 0.703
TBX15
M05795_2.00 		Homo sapiens
NRSGTGTBAN
NTVACACSYN		 SELEX
Yin et al.(2017)
TBX15_eDBD_HT-SELEX 		0.809 0.703
TBX15
M11378_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_01 		0.809 0.703
TBX15
M11379_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_02 		0.809 0.703
TBX15
M05796_2.00 		Homo sapiens
NDSGYGTBAN
NTVACRCSHN		 SELEX
Yin et al.(2017)
TBX15_eDBD_Methyl-HT-SELEX 		0.809 0.703
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000111502 T-box 26 216
ENSDARP00000120954 T-box 70 260
ENSDARP00000139940 T-box 1 173

Links

Other T-box family TFs
Other Danio rerio TFs

176 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_17212 Aegilops tauschii F775_17212 I 0.000
F775_19148 Aegilops tauschii F775_19148 I 0.000
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.000
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N 0.000
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I 0.000
Aquca_011_00570 Aquilegia coerulea Aquca_011_00570 N 0.000
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.000
PK05970.1 Cannabis sativa PK05970.1 I 0.000
PK08631.1 Cannabis sativa PK08631.1 N 0.000
PK11717.1 Cannabis sativa PK11717.1 I 0.000
evm.TU.supercontig_126.30 Carica papaya evm.TU.supercontig_126.30 N 0.000
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.000
evm.TU.supercontig_25.115 Carica papaya evm.TU.supercontig_25.115 N 0.000
evm.TU.supercontig_46.144 Carica papaya evm.TU.supercontig_46.144 N 0.000
Ca_12762 Cicer arietinum Ca_12762 N 0.000
Cla012784 Citrullus lanatus Cla012784 N 0.000
Ciclev10009521m.g Citrus clementina Ciclev10009521m.g N 0.000
Ciclev10022303m.g Citrus clementina Ciclev10022303m.g N 0.000
Ciclev10026498m.g Citrus clementina Ciclev10026498m.g I 0.000
orange1.1g028843m.g Citrus sinensis orange1.1g028843m.g N 0.000
orange1.1g028922m.g Citrus sinensis orange1.1g028922m.g N 0.000
orange1.1g036591m.g Citrus sinensis orange1.1g036591m.g I 0.000
Eucgr.B00866 Eucalyptus grandis Eucgr.B00866 I 0.000
Eucgr.B01869 Eucalyptus grandis Eucgr.B01869 I 0.000
Eucgr.B01964 Eucalyptus grandis Eucgr.B01964 I 0.000
Eucgr.B02896 Eucalyptus grandis Eucgr.B02896 I 0.000
Eucgr.C00725 Eucalyptus grandis Eucgr.C00725 I 0.000
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.000
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.000
Eucgr.E00407 Eucalyptus grandis Eucgr.E00407 N 0.000
Eucgr.F04422 Eucalyptus grandis Eucgr.F04422 N 0.000
Eucgr.F04423 Eucalyptus grandis Eucgr.F04423 N 0.000
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.000
gene07418-v1.0-hybrid Fragaria vesca gene07418-v1.0-hybrid N 0.000
gene08880-v1.0-hybrid Fragaria vesca gene08880-v1.0-hybrid N 0.000
gene15383-v1.0-hybrid Fragaria vesca gene15383-v1.0-hybrid N 0.000
GLYMA01G41610 Glycine max GLYMA01G41610 N 0.000
GLYMA05G04900 Glycine max GLYMA05G04900 I 0.000
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.000
GLYMA11G03770 Glycine max GLYMA11G03770 N 0.000
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.000
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.000
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.000
GLYMA17G15270 Glycine max GLYMA17G15270 I 0.000
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.000
Gorai.004G196800 Gossypium raimondii Gorai.004G196800 N 0.000
Gorai.007G179300 Gossypium raimondii Gorai.007G179300 I 0.000
Gorai.008G158000 Gossypium raimondii Gorai.008G158000 I 0.000
Gorai.009G040800 Gossypium raimondii Gorai.009G040800 N 0.000
Gorai.009G040900 Gossypium raimondii Gorai.009G040900 N 0.000
Gorai.009G146500 Gossypium raimondii Gorai.009G146500 N 0.000
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.000
Gorai.010G096800 Gossypium raimondii Gorai.010G096800 N 0.000
Gorai.012G011700 Gossypium raimondii Gorai.012G011700 N 0.000
Gorai.013G114900 Gossypium raimondii Gorai.013G114900 I 0.000
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.000
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.000
MDP0000124555 Malus domestica MDP0000124555 N 0.000
MDP0000133817 Malus domestica MDP0000133817 I 0.000
MDP0000140609 Malus domestica MDP0000140609 I 0.000
MDP0000143276 Malus domestica MDP0000143276 I 0.000
MDP0000226215 Malus domestica MDP0000226215 N 0.000
MDP0000253904 Malus domestica MDP0000253904 N 0.000
MDP0000261265 Malus domestica MDP0000261265 I 0.000
MDP0000887107 Malus domestica MDP0000887107 I 0.000
MDP0000931057 Malus domestica MDP0000931057 N 0.000
cassava25868.m1 Manihot esculenta cassava25868.m1 I 0.000
cassava2758.m1 Manihot esculenta cassava2758.m1 I 0.000
cassava2804.m1 Manihot esculenta cassava2804.m1 N 0.000
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.000
cassava31571.valid.m1 Manihot esculenta cassava31571.valid.m1 N 0.000
cassava33302.m1 Manihot esculenta cassava33302.m1 I 0.000
cassava6228.valid.m1 Manihot esculenta cassava6228.valid.m1 I 0.000
cassava9944.m1 Manihot esculenta cassava9944.m1 I 0.000
MTR_4g100720 Medicago truncatula MTR_4g100720 N 0.000
mgf018735m Mimulus guttatus mgf018735m N 0.000
mgf024953m Mimulus guttatus mgf024953m N 0.000
GSMUA_Achr11G23500_001 Musa acuminata GSMUA_Achr11G23500_001 N 0.000
GSMUA_Achr2G17960_001 Musa acuminata GSMUA_Achr2G17960_001 N 0.000
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.000
GSMUA_Achr3G27700_001 Musa acuminata GSMUA_Achr3G27700_001 I 0.000
GSMUA_Achr4G21700_001 Musa acuminata GSMUA_Achr4G21700_001 I 0.000
GSMUA_Achr8G14540_001 Musa acuminata GSMUA_Achr8G14540_001 N 0.000
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.000
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I 0.000
POPTR_0001s16970 Populus trichocarpa POPTR_0001s16970 N 0.000
POPTR_0003s06320 Populus trichocarpa POPTR_0003s06320 N 0.000
POPTR_0003s07680 Populus trichocarpa POPTR_0003s07680 N 0.000
POPTR_0006s23780 Populus trichocarpa POPTR_0006s23780 I 0.000
POPTR_0010s12420 Populus trichocarpa POPTR_0010s12420 I 0.000
POPTR_0017s02990 Populus trichocarpa POPTR_0017s02990 I 0.000
POPTR_0018s08500 Populus trichocarpa POPTR_0018s08500 N 0.000
Pm005573 Prunus mume Pm005573 I 0.000
Pm005577 Prunus mume Pm005577 I 0.000
Pm013277 Prunus mume Pm013277 N 0.000
Pm023419 Prunus mume Pm023419 N 0.000
Pm027048 Prunus mume Pm027048 I 0.000
PRUPE_ppa015883mg Prunus persica PRUPE_ppa015883mg I 0.000
PRUPE_ppa016135mg Prunus persica PRUPE_ppa016135mg N 0.000
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.000
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.000
PRUPE_ppa024533mg Prunus persica PRUPE_ppa024533mg N 0.000
PRUPE_ppa026916mg Prunus persica PRUPE_ppa026916mg I 0.000
28226.m000839 Ricinus communis 28226.m000839 I 0.000
SapurV1A.0002s0910 Salix purpurea SapurV1A.0002s0910 N 0.000
SapurV1A.0102s0340 Salix purpurea SapurV1A.0102s0340 I 0.000
SapurV1A.0120s0010 Salix purpurea SapurV1A.0120s0010 I 0.000
SapurV1A.0177s0330 Salix purpurea SapurV1A.0177s0330 N 0.000
SapurV1A.0177s0340 Salix purpurea SapurV1A.0177s0340 N 0.000
SapurV1A.0390s0200 Salix purpurea SapurV1A.0390s0200 I 0.000
SapurV1A.0435s0070 Salix purpurea SapurV1A.0435s0070 N 0.000
SapurV1A.0710s0030 Salix purpurea SapurV1A.0710s0030 I 0.000
SapurV1A.0918s0130 Salix purpurea SapurV1A.0918s0130 I 0.000
SapurV1A.1087s0090 Salix purpurea SapurV1A.1087s0090 N 0.000
SapurV1A.1360s0110 Salix purpurea SapurV1A.1360s0110 N 0.000
SapurV1A.1730s0020 Salix purpurea SapurV1A.1730s0020 I 0.000
SapurV1A.4052s0010 Salix purpurea SapurV1A.4052s0010 N 0.000
Solyc05g008250.1 Solanum lycopersicum Solyc05g008250.1 I 0.000
PGSC0003DMG400030548 Solanum tuberosum PGSC0003DMG400030548 I 0.000
TCM_000535 Theobroma cacao TCM_000535 I 0.000
TCM_015933 Theobroma cacao TCM_015933 I 0.000
TCM_029126 Theobroma cacao TCM_029126 N 0.000
TCM_037379 Theobroma cacao TCM_037379 I 0.000
TCM_037383 Theobroma cacao TCM_037383 I 0.000
TCM_037559 Theobroma cacao TCM_037559 I 0.000
Traes_4DL_26A958CDD Triticum aestivum Traes_4DL_26A958CDD I 0.000
Traes_4DL_8A9D9ACCB Triticum aestivum Traes_4DL_8A9D9ACCB I 0.000
TRIUR3_09734 Triticum urartu TRIUR3_09734 I 0.000
VIT_00s0341g00050 Vitis vinifera VIT_00s0341g00050 N 0.000
VIT_01s0011g04760 Vitis vinifera VIT_01s0011g04760 I 0.000
VIT_04s0008g01870 Vitis vinifera VIT_04s0008g01870 I 0.000
VIT_09s0002g01380 Vitis vinifera VIT_09s0002g01380 N 0.000
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.000
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.000
VIT_17s0000g02660 Vitis vinifera VIT_17s0000g02660 I 0.000