GH16541 (Drosophila grimshawi)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 FBgn0124012 T340663_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Doc3
M03990_2.00 		Drosophila melanogaster
NRGGTGTBAD
HTVACACCYN		 SELEX
Nitta et al.(2015)
Doc3_1 		0.869 0.912
Doc3
M03991_2.00 		Drosophila melanogaster
DAGGTGTBAN
NTVACACCTH		 SELEX
Nitta et al.(2015)
Doc3_2 		0.869 0.912
Doc2
M03992_2.00 		Drosophila melanogaster
DRGGTGTBAN
NTVACACCYH		 SELEX
Nitta et al.(2015)
Doc2_1 		0.863 0.878
Doc2
M03993_2.00 		Drosophila melanogaster
NAGGTGTBAN
NTVACACCTN		 SELEX
Nitta et al.(2015)
Doc2_2 		0.863 0.878
Doc2
M06454_2.00 		Drosophila melanogaster
ARGYGTGAA
TTCACRCYT		 B1H
Zhu et al.(2011)
Doc2_SANGER_5_FBgn0035956 		0.863 0.878
TBX2
M02496_2.00 		Takifugu rubripes
DAGGTGTBRN
NYVACACCTH		 PBM
Weirauch et al.(2014)
pTH9289 		0.736 0.591
TBX2
M02495_2.00 		Gasterosteus aculeatus
NNVDCACNHN
NDNGTGHBNN		 PBM
Weirauch et al.(2014)
pTH9182 		0.736 0.586
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0150447 T-box 60 240

Links

Other T-box family TFs
Other Drosophila grimshawi TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL004174 Aedes aegypti AAEL004174 I 0.876
AAEL013504 Aedes aegypti AAEL013504 I 0.811
AALB004781 Anopheles albimanus AALB004781 I 0.817
AARA007626 Anopheles arabiensis AARA007626 I 0.831
AATE019626 Anopheles atroparvus AATE019626 I 0.831
ACHR005948 Anopheles christyi ACHR005948 I 0.831
ACOM024997 Anopheles coluzzii ACOM024997 I 0.831
ACUA013605 Anopheles culicifacies ACUA013605 I 0.831
ADAC005019 Anopheles darlingi ADAC005019 I 0.817
ADIR008855 Anopheles dirus ADIR008855 I 0.831
AEPI008783 Anopheles epiroticus AEPI008783 I 0.831
AFAF003219 Anopheles farauti AFAF003219 I 0.831
AFUN010103 Anopheles funestus AFUN010103 I 0.831
AGAP005896 Anopheles gambiae AGAP005896 I 0.825
AGAP005895 Anopheles gambiae AGAP005895 I 0.831
AMEC016175 Anopheles melas AMEC016175 I 0.831
AMEM015129 Anopheles merus AMEM015129 I 0.831
AMIN011562 Anopheles minimus AMIN011562 I 0.831
AQUA010990 Anopheles quadriannulatus AQUA010990 I 0.831
ASIS012852 Anopheles sinensis ASIS012852 I 0.831
ASTEI02809 Anopheles stephensi ASTEI02809 I 0.831
CpipJ_CPIJ004922 Culex pipiens CpipJ_CPIJ004922 I 0.802
CPIJ004922 Culex quinquefasciatus CPIJ004922 I 0.802
GF24375 Drosophila ananassae FBgn0101369 I 0.895
GF24374 Drosophila ananassae FBgn0101368 I 0.868
GF10130 Drosophila ananassae FBgn0087171 I 0.863
GG14369 Drosophila erecta FBgn0106628 I 0.899
GG15041 Drosophila erecta FBgn0107295 I 0.863
GG14368 Drosophila erecta FBgn0106627 I 0.869
GH14955 Drosophila grimshawi FBgn0122430 I 0.872
GH16540 Drosophila grimshawi FBgn0124011 I 0.878
Doc1 Drosophila melanogaster FBgn0028789 I 0.899
Doc3 Drosophila melanogaster FBgn0035954 D 0.869
Doc2 Drosophila melanogaster FBgn0035956 D 0.863
GI11482 Drosophila mojavensis FBgn0134242 I 0.871
GI13829 Drosophila mojavensis FBgn0136583 I 0.845
GI13831 Drosophila mojavensis FBgn0136585 I 0.897
GL15081 Drosophila persimilis FBgn0152685 I 0.863
GL15034 Drosophila persimilis FBgn0152638 I 0.899
GL15033 Drosophila persimilis FBgn0152637 I 0.869
GA18682 Drosophila pseudoobscura FBgn0078682 I 0.899
GA18655 Drosophila pseudoobscura FBgn0078655 I 0.869
GA18721 Drosophila pseudoobscura FBgn0078721 I 0.863
GM24895 Drosophila sechellia FBgn0179757 I 0.863
GM25112 Drosophila sechellia FBgn0179973 I 0.869
GM25113 Drosophila sechellia FBgn0179974 I 0.899
GD14148 Drosophila simulans FBgn0185836 I 0.869
GD14149 Drosophila simulans FBgn0185837 I 0.899
GJ11695 Drosophila virilis FBgn0198949 I 0.835
GJ11697 Drosophila virilis FBgn0198951 I 0.908
GK12353 Drosophila willistoni FBgn0214363 I 0.895
GK12352 Drosophila willistoni FBgn0214362 I 0.869
GK12279 Drosophila willistoni FBgn0214289 I 0.864
GE20799 Drosophila yakuba FBgn0238093 I 0.869
GE21264 Drosophila yakuba FBgn0238533 I 0.855
GE20800 Drosophila yakuba FBgn0238094 I 0.899
ENSGMOG00000002896 Gadus morhua ENSGMOG00000002896 I 0.736
TBX2 Gasterosteus aculeatus ENSGACG00000013575 D 0.736
LCUP005946 Lucilia cuprina LCUP005946 I 0.849
LCUP005945 Lucilia cuprina LCUP005945 I 0.879
LCUP005947 Lucilia cuprina LCUP005947 I 0.844
MESCA005219 Megaselia scalaris MESCA005219 I 0.844
TBX3 Monodelphis domestica ENSMODG00000012059 I 0.736
MDOA015287 Musca domestica MDOA015287 I 0.849
MDOA006037 Musca domestica MDOA006037 I 0.890
MDOA003812 Musca domestica MDOA003812 I 0.856
ENSONIG00000010454 Oreochromis niloticus ENSONIG00000010454 I 0.736
TBX2 Oryzias latipes ENSORLG00000014792 I 0.736
ENSPFOG00000016384 Poecilia formosa ENSPFOG00000016384 I 0.736
TBX2 Takifugu rubripes ENSTRUG00000008297 D 0.736
ENSXMAG00000005715 Xiphophorus maculatus ENSXMAG00000005715 I 0.736