CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACUA027826
(
Anopheles culicifacies
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
ACUA027826
T341387_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
byn
M03984_2.00
Drosophila melanogaster
ABGTGYGADDD
HHHTCRCACVT
SELEX
Nitta et al.(2015)
byn_1
0.876
0.866
byn
M03985_2.00
Drosophila melanogaster
DNGTGYBAHWWDTVRCACNH
DNGTGYBAHWWDTVRCACNH
SELEX
Nitta et al.(2015)
byn_2
0.876
0.866
byn
M03986_2.00
Drosophila melanogaster
RDGTGYGADNDNDNNNNNNDRDGTGYGADD
HHTCRCACHYHNNNNNNHNHNHTCRCACHY
SELEX
Nitta et al.(2015)
byn_3
0.876
0.866
byn
M03987_2.00
Drosophila melanogaster
NNTMRCAYNWWNRTGYKAHN
NDTMRCAYNWWNRTGYKANN
SELEX
Nitta et al.(2015)
byn_4
0.876
0.866
byn
M06453_2.00
Drosophila melanogaster
ADGTGCDA
THGCACHT
B1H
Zhu et al.(2011)
byn_FlyReg_FBgn0011723
0.876
0.866
T
M05809_2.00
Homo sapiens
NANGTGYGAHWWNTVRCACCTN
NAGGTGYBANWWDTCRCACNTN
SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_1
0.804
0.710
T
M05810_2.00
Homo sapiens
DTCRCAYVTABGTGYGAH
DTCRCACVTABRTGYGAH
SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_2
0.804
0.710
T
M09427_2.00
Homo sapiens
BYNVCANNNVDGTGWKARDN
NHYTMWCACHBNNNTGBNRV
Misc
Kulakovskiy et al.(2013)
BRAC_HUMAN.H11MO.0.A
0.804
0.710
T
M09431_2.00
Mus musculus
VVNRAWTTSACASNYHDVTGBNMAN
NTKNVCABHDRNSTGTSAAWTYNBB
Misc
Kulakovskiy et al.(2013)
BRAC_MOUSE.H11MO.0.B
0.804
0.710
T
M09651_2.00
Mus musculus
NYTVDCASNNNNSTGHBARNN
NNYTVDCASNNNNSTGHBARN
Misc
Heinz et al.(2010)
Mesoendoderm-Brachyury_GSE54963
0.804
0.710
T
M11384_2.00
Homo sapiens
MKHBTSACACSTAGGTGTGAAATK
MATTTCACACCTASGTGTSAVDMK
Transfac
Matys et al.(2006)
V$BRACH_01
0.804
0.710
T
M05811_2.00
Homo sapiens
NABGTGYGAHWWNTVRCACSTN
NASGTGYBANWWDTCRCACVTN
SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_1
0.804
0.710
T
M05812_2.00
Homo sapiens
DTMRCAYVTABGTGYKAH
DTMRCACVTABRTGYKAH
SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_2
0.804
0.710
TBX19
M03562_2.00
Homo sapiens
NDTVRCACVTANGTGYKANN
NNTMRCACNTABGTGYBAHN
SELEX
Jolma et al.(2013)
TBX19_1
0.799
0.698
TBX19
M05803_2.00
Homo sapiens
NAGGTGYBAHWDTMRCACNTN
NANGTGYKAHWDTVRCACCTN
SELEX
Yin et al.(2017)
TBX19_eDBD_HT-SELEX
0.799
0.698
TBX19
M05804_2.00
Homo sapiens
NANGTGYKAHWDTVRCACSTN
NASGTGYBAHWDTMRCACNTN
SELEX
Yin et al.(2017)
TBX19_eDBD_Methyl-HT-SELEX
0.799
0.698
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACUA027826-PA
T-box
197
375
VTLDDRDLWLRFQNLTNEMIVTKNGRRMFPVVKVTATGLDPTAMYTVLLEFSQVDSHRWKYVNGEWVAGGKAEAPPPNPVYVHPESPNFGQHWMKEPISFAKVKLTNKTNGNGQIMLNSLHKYEPRVHLVQVVSDARDQRNVHTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLD
Links
Other
T-box
family TFs
Other
Anopheles culicifacies
TFs
162 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL011926
Aedes aegypti
AAEL011926
I
0.920
ENSAMEG00000004326
Ailuropoda melanoleuca
ENSAMEG00000004326
I
0.799
Alligator_sinensis_CCG010779.1
Alligator sinensis
Alligator_sinensis_CCG010779.1
I
0.799
Alligator_sinensis_CCG019781.1
Alligator sinensis
Alligator_sinensis_CCG019781.1
I
0.782
ENSAPLG00000010506
Anas platyrhynchos
ENSAPLG00000010506
I
0.799
T
Anolis carolinensis
ENSACAG00000003467
I
0.799
TBX19
Anolis carolinensis
ENSACAG00000010693
I
0.799
AALB003755
Anopheles albimanus
AALB003755
I
0.911
AARA000721
Anopheles arabiensis
AARA000721
I
0.920
ACOM032190
Anopheles coluzzii
ACOM032190
I
0.920
ADAC000433
Anopheles darlingi
ADAC000433
I
0.911
ADIR001942
Anopheles dirus
ADIR001942
I
0.920
AEPI011219
Anopheles epiroticus
AEPI011219
I
0.920
AFUN010277
Anopheles funestus
AFUN010277
I
0.920
AGAP011927
Anopheles gambiae
AGAP011927
I
0.920
AMEC020399
Anopheles melas
AMEC020399
I
0.919
AMIN008605
Anopheles minimus
AMIN008605
I
0.920
AQUA010101
Anopheles quadriannulatus
AQUA010101
I
0.920
ASIS006984
Anopheles sinensis
ASIS006984
I
0.911
ASTEI05115
Anopheles stephensi
ASTEI05115
I
0.920
GB51013
Apis mellifera
GB51013
I
0.836
Afo_R013116
Aptenodytes forsteri
Afo_R013116
I
0.799
ENSAMXG00000003991
Astyanax mexicanus
ENSAMXG00000003991
I
0.771
BGIBMGA000322
Bombyx mori
BGIBMGA000322
I
0.885
ENSP00000356795-D1
Bos grunniens
ENSP00000356795-D1
I
0.799
TBX19
Bos taurus
ENSBTAG00000002952
I
0.799
T
Bos taurus
ENSBTAG00000018681
I
0.804
estExt_fgenesh2_pg.C_650149
Branchiostoma floridae
estExt_fgenesh2_pg.C_650149
I
0.763
estExt_GenewiseH_1.C_9340011
Branchiostoma floridae
estExt_GenewiseH_1.C_9340011
I
0.777
estExt_gwp.C_650221
Branchiostoma floridae
estExt_gwp.C_650221
I
0.777
estExt_gwp.C_9340008
Branchiostoma floridae
estExt_gwp.C_9340008
I
0.763
Brh_R012030
Buceros rhinoceros
Brh_R012030
I
0.799
T
Callithrix jacchus
ENSCJAG00000012508
I
0.804
TBX19
Callithrix jacchus
ENSCJAG00000016812
I
0.799
Aan_R012309
Calypte anna
Aan_R012309
I
0.799
Cflo_04209--XP_396427.2_APIME
Camponotus floridanus
Cflo_04209--XP_396427.2_APIME
I
0.869
T
Canis familiaris
ENSCAFG00000000807
I
0.809
TBX19
Canis familiaris
ENSCAFG00000015268
I
0.799
T
Cavia porcellus
ENSCPOG00000001358
I
0.804
TBX19
Cavia porcellus
ENSCPOG00000012456
I
0.799
Cmyd_10017804
Chelonia mydas
Cmyd_10017804
I
0.804
Cmyd_10020966
Chelonia mydas
Cmyd_10020966
I
0.794
ENSCSAG00000011055
Chlorocebus sabaeus
ENSCSAG00000011055
I
0.799
ENSCSAG00000012200
Chlorocebus sabaeus
ENSCSAG00000012200
I
0.804
TBX19
Choloepus hoffmanni
ENSCHOG00000010387
I
0.787
CLEC002870
Cimex lectularius
CLEC002870
I
0.877
brachyury
Ciona intestinalis
ENSCING00000000810
I
0.744
ENSCSAVG00000002247
Ciona savignyi
ENSCSAVG00000002247
I
0.749
CGI_10018059
Crassostrea gigas
CGI_10018059
I
0.814
CpipJ_CPIJ011372
Culex pipiens
CpipJ_CPIJ011372
I
0.876
CPIJ011372
Culex quinquefasciatus
CPIJ011372
I
0.876
tb
Danio rerio
ENSDARG00000039806
I
0.777
tbx19
Danio rerio
ENSDARG00000079187
I
0.744
DAPPUDRAFT_44582
Daphnia pulex
DAPPUDRAFT_44582
I
0.770
TBX19
Dasypus novemcinctus
ENSDNOG00000015810
I
0.773
ENSDNOG00000016178
Dasypus novemcinctus
ENSDNOG00000016178
I
0.804
Tbx19
Dipodomys ordii
ENSDORG00000014860
I
0.795
GF25302
Drosophila ananassae
FBgn0102294
I
0.883
GG15542
Drosophila erecta
FBgn0107790
I
0.876
GH14805
Drosophila grimshawi
FBgn0122281
I
0.883
byn
Drosophila melanogaster
FBgn0011723
D
0.876
GI11508
Drosophila mojavensis
FBgn0134268
I
0.883
GL25108
Drosophila persimilis
FBgn0162695
I
0.883
GA20217
Drosophila pseudoobscura
FBgn0080212
I
0.883
GM25308
Drosophila sechellia
FBgn0180168
I
0.876
GD14339
Drosophila simulans
FBgn0186024
I
0.876
GJ13700
Drosophila virilis
FBgn0200921
I
0.883
GK25266
Drosophila willistoni
FBgn0227225
I
0.883
GE21864
Drosophila yakuba
FBgn0239106
I
0.876
T
Equus caballus
ENSECAG00000007994
I
0.804
TBX19
Equus caballus
ENSECAG00000010186
I
0.799
TBX19
Felis catus
ENSFCAG00000015047
I
0.799
ENSFALG00000005706
Ficedula albicollis
ENSFALG00000005706
I
0.799
ENSGMOG00000017391
Gadus morhua
ENSGMOG00000017391
I
0.744
T
Gallus gallus
ENSGALG00000011489
I
0.809
TBX19
Gallus gallus
ENSGALG00000015244
I
0.799
tb
Gasterosteus aculeatus
ENSGACG00000005258
I
0.749
Gfo_R000170
Geospiza fortis
Gfo_R000170
I
0.799
TBX19
Gorilla gorilla
ENSGGOG00000001338
I
0.799
T
Gorilla gorilla
ENSGGOG00000007693
I
0.804
Hsal_03707--XP_396427.2_APIME
Harpegnathos saltator
Hsal_03707--XP_396427.2_APIME
I
0.877
TBX19
Homo sapiens
ENSG00000143178
D
0.799
T
Homo sapiens
ENSG00000164458
D
0.804
XP_002154016.1
Hydra magnipapillata
XP_002154016.1
I
0.770
XP_002164912.1
Hydra magnipapillata
XP_002164912.1
I
0.762
ENSSTOG00000019913
Ictidomys tridecemlineatus
ENSSTOG00000019913
I
0.799
ENSSTOG00000028238
Ictidomys tridecemlineatus
ENSSTOG00000028238
I
0.804
ENSLACG00000011042
Latimeria chalumnae
ENSLACG00000011042
I
0.748
ENSLACG00000015449
Latimeria chalumnae
ENSLACG00000015449
I
0.777
ENSLOCG00000010586
Lepisosteus oculatus
ENSLOCG00000010586
I
0.769
ENSLOCG00000016526
Lepisosteus oculatus
ENSLOCG00000016526
I
0.777
LotgiG154800
Lottia gigantea
LotgiG154800
I
0.776
TBX19
Loxodonta africana
ENSLAFG00000011227
I
0.799
T
Loxodonta africana
ENSLAFG00000012505
I
0.804
LCUP008716
Lucilia cuprina
LCUP008716
I
0.883
ENSMMUP00000022430
Macaca fascicularis
ENSMMUP00000022430
I
0.804
ENSP00000356795
Macaca fascicularis
ENSP00000356795
I
0.799
SFT2D2
Macaca mulatta
ENSMMUG00000005283
I
0.799
T
Macaca mulatta
ENSMMUG00000017047
I
0.804
MCINX002868
Melitaea cinxia
MCINX002868
I
0.885
TBX19
Microcebus murinus
ENSMICG00000007817
I
0.799
ML174736a
Mnemiopsis leidyi
ML174736a
I
0.786
TBX19
Monodelphis domestica
ENSMODG00000002921
I
0.799
T
Monodelphis domestica
ENSMODG00000006318
I
0.804
MDOA012486
Musca domestica
MDOA012486
I
0.883
ENSMPUG00000000522
Mustela putorius furo
ENSMPUG00000000522
I
0.799
Tbx19
Mus musculus
ENSMUSG00000026572
I
0.799
T
Mus musculus
ENSMUSG00000062327
D
0.804
Myotis_brandtii_TBX19_10024384
Myotis brandtii
Myotis_brandtii_TBX19_10024384
I
0.799
TBX19
Myotis lucifugus
ENSMLUG00000011933
I
0.799
NV14821
Nasonia vitripennis
NV14821
I
0.877
ENSNLEG00000011552
Nomascus leucogenys
ENSNLEG00000011552
I
0.804
ENSNLEG00000014917
Nomascus leucogenys
ENSNLEG00000014917
I
0.799
T
Ochotona princeps
ENSOPRG00000003376
I
0.803
TBX19
Ochotona princeps
ENSOPRG00000016564
I
0.794
SNAPOd2T00000418001
Oikopleura dioica
SNAPOd2T00000418001
I
0.754
Ogr19099
Ophisaurus gracilis
Ogr19099
I
0.799
ENSONIG00000008985
Oreochromis niloticus
ENSONIG00000008985
I
0.785
ENSONIG00000009906
Oreochromis niloticus
ENSONIG00000009906
I
0.777
T
Ornithorhynchus anatinus
ENSOANG00000012289
I
0.809
T
Oryctolagus cuniculus
ENSOCUG00000000660
I
0.763
TBX19
Oryctolagus cuniculus
ENSOCUG00000014555
I
0.799
tb
Oryzias latipes
ENSORLG00000011262
I
0.779
TBX19
Otolemur garnettii
ENSOGAG00000004458
I
0.799
T
Otolemur garnettii
ENSOGAG00000007863
I
0.804
ENSOARG00000004863
Ovis aries
ENSOARG00000004863
I
0.804
ENSOARG00000012617
Ovis aries
ENSOARG00000012617
I
0.799
TBX19
Pan troglodytes
ENSPTRG00000001647
I
0.799
T
Pan troglodytes
ENSPTRG00000018789
I
0.804
ENSPANG00000005068
Papio anubis
ENSPANG00000005068
I
0.804
PHUM392580
Pediculus humanus
PHUM392580
I
0.873
ENSPSIG00000005649
Pelodiscus sinensis
ENSPSIG00000005649
I
0.804
ENSPSIG00000015509
Pelodiscus sinensis
ENSPSIG00000015509
I
0.803
ENSPFOG00000006034
Poecilia formosa
ENSPFOG00000006034
I
0.760
ENSPFOG00000016071
Poecilia formosa
ENSPFOG00000016071
I
0.772
Pvit_02210
Pogona vitticeps
Pvit_02210
I
0.799
Pvit_04554
Pogona vitticeps
Pvit_04554
I
0.799
ENSPPYG00000017163
Pongo abelii
ENSPPYG00000017163
I
0.804
T
Rattus norvegicus
ENSRNOG00000012229
I
0.804
RPRC001186
Rhodnius prolixus
RPRC001186
I
0.868
ENSSHAG00000018904
Sarcophilus harrisii
ENSSHAG00000018904
I
0.804
ENSSHAG00000018940
Sarcophilus harrisii
ENSSHAG00000018940
I
0.799
TBX19
Sus scrofa
ENSSSCG00000006299
I
0.799
T
Taeniopygia guttata
ENSTGUG00000009448
I
0.809
TBX19
Taeniopygia guttata
ENSTGUG00000013434
I
0.799
tbx19
Takifugu rubripes
ENSTRUG00000005718
I
0.764
tb
Takifugu rubripes
ENSTRUG00000011958
I
0.749
tbx19
Tetraodon nigroviridis
ENSTNIG00000006586
I
0.768
tb
Tetraodon nigroviridis
ENSTNIG00000016613
I
0.741
TC014076
Tribolium castaneum
TC014076
I
0.860
TriadG25521
Trichoplax adhaerens
TriadG25521
I
0.830
T
Tursiops truncatus
ENSTTRG00000016665
I
0.804
TBX19
Vicugna pacos
ENSVPAG00000000446
I
0.799
1XBR_A
Xenopus laevis
1XBR_A
I
0.827
1XBR_B
Xenopus laevis
1XBR_B
I
0.827
t2.S
Xenopus laevis
XB-GENE-5981788
I
0.777
tbxt.L
Xenopus laevis
XB-GENE-6255736
I
0.827
tbxt.S
Xenopus laevis
XB-GENE-865212
I
0.827
tbxt
Xenopus tropicalis
XB-GENE-478789
I
0.826
t2
Xenopus tropicalis
XB-GENE-5981736
I
0.803
ENSXMAG00000006226
Xiphophorus maculatus
ENSXMAG00000006226
I
0.759
ENSXMAG00000011123
Xiphophorus maculatus
ENSXMAG00000011123
I
0.771