NBO_6g0091 (Nosema bombycis)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 NBO_6g0091 T342737_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.780 0.780
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.780 0.780
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.780 0.780
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.740 0.740
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.740 0.740
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.740 0.740
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.740 0.740
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.740 0.740
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.740 0.740
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.740 0.740
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.740 0.740
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.740 0.740
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.740 0.740
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOB15340 TBP 1 43
EOB15340 TBP 51 134

Links

Other TBP family TFs
Other Nosema bombycis TFs

651 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_14547 Aegilops tauschii F775_14547 N 0.000
F775_20324 Aegilops tauschii F775_20324 N 0.000
Bo9g001070 Brassica oleracea Bo9g001070 N 0.000
Cagra.2428s0008 Capsella grandiflora Cagra.2428s0008 N 0.000
Cucsa.140430 Cucumis sativus Cucsa.140430 N 0.000
GLYMA14G09231 Glycine max GLYMA14G09231 I 0.000
GLYMA17G21573 Glycine max GLYMA17G21573 I 0.000
Lus10018724.g Linum usitatissimum Lus10018724.g N 0.000
Lus10036286.g Linum usitatissimum Lus10036286.g N 0.000
mgf017216m Mimulus guttatus mgf017216m N 0.000
mgf025738m Mimulus guttatus mgf025738m N 0.000
GSMUA_Achr9G11300_001 Musa acuminata GSMUA_Achr9G11300_001 N 0.000
OBART02G35840 Oryza barthii OBART02G35840 N 0.000
OB02G42630 Oryza brachyantha OB02G42630 N 0.000
OB12G25120 Oryza brachyantha OB12G25120 N 0.000
ORGLA05G0025000 Oryza glaberrima ORGLA05G0025000 N 0.000
OGLUM03G27730 Oryza glumaepatula OGLUM03G27730 I 0.000
OGLUM05G02640 Oryza glumaepatula OGLUM05G02640 I 0.000
BGIOSGA009202 Oryza indica BGIOSGA009202 N 0.000
OLONG_013198 Oryza longistaminata OLONG_013198 I 0.000
OLONG_008235 Oryza longistaminata OLONG_008235 N 0.000
OLONG_003839 Oryza longistaminata OLONG_003839 N 0.000
OMERI05G02570 Oryza meridionalis OMERI05G02570 I 0.000
ONIVA10G20730 Oryza nivara ONIVA10G20730 N 0.000
OPUNC01G09800 Oryza punctata OPUNC01G09800 N 0.000
OPUNC09G08950 Oryza punctata OPUNC09G08950 N 0.000
OPUNC06G04110 Oryza punctata OPUNC06G04110 N 0.000
ORUFI10G19390 Oryza rufipogon ORUFI10G19390 N 0.000
Pavir.Ca01237 Panicum virgatum Pavir.Ca01237 I 0.000
Pavir.J12143 Panicum virgatum Pavir.J12143 I 0.000
PDK_20s1361701g002 Phoenix dactylifera PDK_20s1361701g002 N 0.000
Pm005303 Prunus mume Pm005303 N 0.000
Traes_6AS_E0A257EEA Triticum aestivum Traes_6AS_E0A257EEA N 0.000
TRIUR3_21181 Triticum urartu TRIUR3_21181 N 0.000
TRIUR3_25332 Triticum urartu TRIUR3_25332 N 0.000
TRIUR3_26354 Triticum urartu TRIUR3_26354 N 0.000
TRIUR3_33471 Triticum urartu TRIUR3_33471 N 0.000
AC177924.2_FG001 Zea mays AC177924.2_FG001 N 0.000
GRMZM2G316758 Zea mays GRMZM2G316758 N 0.000