tbpl2 (Xenopus tropicalis)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 XB-GENE-876138 T343262_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.958 0.958
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.958 0.958
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.958 0.958
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.958 0.958
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.958 0.958
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.958 0.958
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.958 0.958
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.958 0.958
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.958 0.958
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.958 0.958
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.802 0.802
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.802 0.802
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.802 0.802
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAJ81377 TBP 145 227
CAJ81377 TBP 235 318

Links

Other TBP family TFs
Other Xenopus tropicalis TFs

761 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000003831 Ailuropoda melanoleuca ENSAMEG00000003831 I 0.000
Alligator_sinensis_CCG014289.1 Alligator sinensis Alligator_sinensis_CCG014289.1 I 0.000
ENSAPLG00000005213 Anas platyrhynchos ENSAPLG00000005213 I 0.000
MYBL2 Anolis carolinensis ENSACAG00000002463 I 0.000
Afo_R009791 Aptenodytes forsteri Afo_R009791 I 0.000
ENSP00000217026-D1 Bos grunniens ENSP00000217026-D1 I 0.000
MYBL2 Bos taurus ENSBTAG00000007783 I 0.000
Brh_R006404 Buceros rhinoceros Brh_R006404 I 0.000
ENSCJAG00000017819 Callithrix jacchus ENSCJAG00000017819 I 0.000
ENSCJAG00000031864 Callithrix jacchus ENSCJAG00000031864 I 0.000
Aan_R003280 Calypte anna Aan_R003280 I 0.000
MYBL2 Canis familiaris ENSCAFG00000009336 I 0.000
MYBL2 Cavia porcellus ENSCPOG00000020458 I 0.000
Cmyd_10015187 Chelonia mydas Cmyd_10015187 I 0.000
ENSCSAG00000014069 Chlorocebus sabaeus ENSCSAG00000014069 I 0.000
mybl2b Danio rerio ENSDARG00000032264 I 0.000
Mybl2 Dipodomys ordii ENSDORG00000006855 I 0.000
MYBL2 Equus caballus ENSECAG00000005925 I 0.000
MYBL2 Erinaceus europaeus ENSEEUG00000007817 I 0.000
MYBL2 Felis catus ENSFCAG00000011141 I 0.000
ENSFALG00000005745 Ficedula albicollis ENSFALG00000005745 I 0.000
ENSGMOG00000014402 Gadus morhua ENSGMOG00000014402 N 0.000
MYBL2 Gallus gallus ENSGALG00000003503 I 0.000
Gfo_R005427 Geospiza fortis Gfo_R005427 I 0.000
MYBL2 Homo sapiens ENSG00000101057 D 0.000
ENSSTOG00000010149 Ictidomys tridecemlineatus ENSSTOG00000010149 I 0.000
ENSLACG00000018995 Latimeria chalumnae ENSLACG00000018995 I 0.000
ENSLOCG00000001337 Lepisosteus oculatus ENSLOCG00000001337 I 0.000
MYBL2 Loxodonta africana ENSLAFG00000006698 I 0.000
ENSMMUP00000023843 Macaca fascicularis ENSMMUP00000023843 I 0.000
MYBL2 Meleagris gallopavo ENSMGAG00000002972 I 0.000
MYBL2 Monodelphis domestica ENSMODG00000001228 I 0.000
ENSMPUG00000017680 Mustela putorius furo ENSMPUG00000017680 I 0.000
Mybl2 Mus musculus ENSMUSG00000017861 D 0.000
Myotis_brandtii_MYBL2_10025179 Myotis brandtii Myotis_brandtii_MYBL2_10025179 I 0.000
MYBL2 Myotis lucifugus ENSMLUG00000016678 I 0.000
ENSNLEG00000006566 Nomascus leucogenys ENSNLEG00000006566 I 0.000
MYBL2 Ochotona princeps ENSOPRG00000009014 I 0.000
Ogr13963 Ophisaurus gracilis Ogr13963 I 0.000
ENSOANG00000011081 Ornithorhynchus anatinus ENSOANG00000011081 I 0.000
MYBL2 Oryctolagus cuniculus ENSOCUG00000005775 I 0.000
MYBL2 Otolemur garnettii ENSOGAG00000007702 I 0.000
ENSOARG00000003547 Ovis aries ENSOARG00000003547 I 0.000
MYBL2 Pan troglodytes ENSPTRG00000013510 I 0.000
ENSPANG00000023992 Papio anubis ENSPANG00000023992 I 0.000
ENSPSIG00000016162 Pelodiscus sinensis ENSPSIG00000016162 I 0.000
Pvit_07752 Pogona vitticeps Pvit_07752 I 0.000
ENSPPYG00000011022 Pongo abelii ENSPPYG00000011022 I 0.000
MYBL2 Procavia capensis ENSPCAG00000004366 I 0.000
MYBL2 Pteropus vampyrus ENSPVAG00000001218 I 0.000
Mybl2 Rattus norvegicus ENSRNOG00000007805 I 0.000
ENSSHAG00000005654 Sarcophilus harrisii ENSSHAG00000005654 I 0.000
MYBL2 Sus scrofa ENSSSCG00000007366 I 0.000
ENSTGUG00000004426 Taeniopygia guttata ENSTGUG00000004426 I 0.000
MYBL2 Tursiops truncatus ENSTTRG00000013493 I 0.000
Tal_R007942 Tyto alba Tal_R007942 I 0.000
S33643 Xenopus laevis S33643 I 0.000
mybl2.S Xenopus laevis XB-GENE-982423 I 0.000
mybl2 Xenopus tropicalis XB-GENE-982419 I 0.000