Cla007227 (Citrullus lanatus)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Cla007227 T344531_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP1
M07276_2.00 		Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY		 Dap-seq
OMalley et al.(2016)
TCP1_col_a 		0.905 0.464
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.900 0.477
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.896 0.444
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla007227 TCP 102 252

Links

Other TCP family TFs
Other Citrullus lanatus TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000002048 Ailuropoda melanoleuca ENSAMEG00000002048 N 0.000
ENSAMEG00000014764 Ailuropoda melanoleuca ENSAMEG00000014764 N 0.000
ENSAMEG00000015014 Ailuropoda melanoleuca ENSAMEG00000015014 I 0.000
Alligator_sinensis_CCG018588.1 Alligator sinensis Alligator_sinensis_CCG018588.1 N 0.000
ENSAPLG00000003822 Anas platyrhynchos ENSAPLG00000003822 N 0.000
ENSAPLG00000007386 Anas platyrhynchos ENSAPLG00000007386 N 0.000
ENSAPLG00000016052 Anas platyrhynchos ENSAPLG00000016052 N 0.000
MYT1L Anolis carolinensis ENSACAG00000005667 N 0.000
MYT1 Anolis carolinensis ENSACAG00000006249 N 0.000
ST18 Anolis carolinensis ENSACAG00000017961 N 0.000
GB48919 Apis mellifera GB48919 N 0.000
Afo_R001804 Aptenodytes forsteri Afo_R001804 N 0.000
Afo_R010888 Aptenodytes forsteri Afo_R010888 N 0.000
Afo_R015783 Aptenodytes forsteri Afo_R015783 N 0.000
ENSAMXG00000001873 Astyanax mexicanus ENSAMXG00000001873 N 0.000
ENSAMXG00000002473 Astyanax mexicanus ENSAMXG00000002473 N 0.000
ENSAMXG00000013383 Astyanax mexicanus ENSAMXG00000013383 N 0.000
ENSAMXG00000013895 Astyanax mexicanus ENSAMXG00000013895 N 0.000
ENSBTAP00000004603-D1 Bos grunniens ENSBTAP00000004603-D1 N 0.000
ENSBTAP00000038860-D1 Bos grunniens ENSBTAP00000038860-D1 N 0.000
ENSP00000276480-D1 Bos grunniens ENSP00000276480-D1 N 0.000
ST18 Bos taurus ENSBTAG00000005560 N 0.000
MYT1 Bos taurus ENSBTAG00000006352 N 0.000
estExt_fgenesh2_pg.C_1230027 Branchiostoma floridae estExt_fgenesh2_pg.C_1230027 N 0.000
Brh_R002741 Buceros rhinoceros Brh_R002741 N 0.000
MYT1L Callithrix jacchus ENSCJAG00000007286 N 0.000
ST18 Callithrix jacchus ENSCJAG00000014630 N 0.000
Aan_R008628 Calypte anna Aan_R008628 N 0.000
Aan_R012927 Calypte anna Aan_R012927 N 0.000
Cflo_03590--XP_394358.3_APIME Camponotus floridanus Cflo_03590--XP_394358.3_APIME N 0.000
ST18 Canis familiaris ENSCAFG00000006762 N 0.000
MYT1 Canis familiaris ENSCAFG00000013222 N 0.000
ST18 Cavia porcellus ENSCPOG00000005486 N 0.000
MYT1 Cavia porcellus ENSCPOG00000006790 N 0.000
MYT1L Cavia porcellus ENSCPOG00000013246 N 0.000
ENSCSAG00000006922 Chlorocebus sabaeus ENSCSAG00000006922 N 0.000
ENSCSAG00000014731 Chlorocebus sabaeus ENSCSAG00000014731 N 0.000
ENSCSAG00000016796 Chlorocebus sabaeus ENSCSAG00000016796 N 0.000
ST18 Choloepus hoffmanni ENSCHOG00000010565 N 0.000
myt1la Danio rerio ENSDARG00000008209 N 0.000
myt1a Danio rerio ENSDARG00000074030 N 0.000
myt1b Danio rerio ENSDARG00000102879 N 0.000
ST18 Dasypus novemcinctus ENSDNOG00000009682 N 0.000
MYT1 Dasypus novemcinctus ENSDNOG00000032037 N 0.000
MYT1L Dasypus novemcinctus ENSDNOG00000037275 N 0.000
St18 Dipodomys ordii ENSDORG00000002635 N 0.000
Myt1 Dipodomys ordii ENSDORG00000006425 N 0.000
ST18 Equus caballus ENSECAG00000011546 N 0.000
MYT1 Equus caballus ENSECAG00000013810 N 0.000
MYT1L Equus caballus ENSECAG00000014657 N 0.000
MYT1L Erinaceus europaeus ENSEEUG00000013615 N 0.000
MYT1 Felis catus ENSFCAG00000001189 N 0.000
ST18 Felis catus ENSFCAG00000008556 N 0.000
MYT1L Felis catus ENSFCAG00000013984 N 0.000
ENSFALG00000002053 Ficedula albicollis ENSFALG00000002053 N 0.000
ENSFALG00000010174 Ficedula albicollis ENSFALG00000010174 N 0.000
ENSFALG00000010354 Ficedula albicollis ENSFALG00000010354 N 0.000
ENSGMOG00000006285 Gadus morhua ENSGMOG00000006285 N 0.000
ENSGMOG00000012782 Gadus morhua ENSGMOG00000012782 N 0.000
MYT1 Gallus gallus ENSGALG00000005932 N 0.000
ST18 Gallus gallus ENSGALG00000015254 N 0.000
MYT1L Gallus gallus ENSGALG00000016384 N 0.000
myt1la Gasterosteus aculeatus ENSGACG00000011952 N 0.000
myt1b Gasterosteus aculeatus ENSGACG00000013224 N 0.000
ENSGACG00000013255 Gasterosteus aculeatus ENSGACG00000013255 N 0.000
Gfo_R002934 Geospiza fortis Gfo_R002934 N 0.000
Gfo_R005271 Geospiza fortis Gfo_R005271 N 0.000
Gfo_R012653 Geospiza fortis Gfo_R012653 N 0.000
ST18 Gorilla gorilla ENSGGOG00000001223 N 0.000
MYT1 Gorilla gorilla ENSGGOG00000006335 N 0.000
MYT1L Gorilla gorilla ENSGGOG00000026335 N 0.000
Hsal_01303--XP_394358.3_APIME Harpegnathos saltator Hsal_01303--XP_394358.3_APIME N 0.000
HMEL002385 Heliconius melpomene HMEL002385 N 0.000
ST18 Homo sapiens ENSG00000147488 I 0.000
MYT1L Homo sapiens ENSG00000186487 I 0.000
MYT1 Homo sapiens ENSG00000196132 N 0.000
ENSSTOG00000001345 Ictidomys tridecemlineatus ENSSTOG00000001345 N 0.000
ENSSTOG00000008133 Ictidomys tridecemlineatus ENSSTOG00000008133 N 0.000
ENSSTOG00000016500 Ictidomys tridecemlineatus ENSSTOG00000016500 N 0.000
ENSLACG00000008399 Latimeria chalumnae ENSLACG00000008399 I 0.000
ENSLACG00000014372 Latimeria chalumnae ENSLACG00000014372 N 0.000
ENSLOCG00000005236 Lepisosteus oculatus ENSLOCG00000005236 N 0.000
ENSLOCG00000005847 Lepisosteus oculatus ENSLOCG00000005847 N 0.000
ENSLOCG00000017216 Lepisosteus oculatus ENSLOCG00000017216 N 0.000
MYT1L Loxodonta africana ENSLAFG00000002751 N 0.000
MYT1 Loxodonta africana ENSLAFG00000022251 N 0.000
ENSMMUP00000012198 Macaca fascicularis ENSMMUP00000012198 N 0.000
ENSP00000276480 Macaca fascicularis ENSP00000276480 N 0.000
ENSP00000327465 Macaca fascicularis ENSP00000327465 N 0.000
MYT1 Macaca mulatta ENSMMUG00000002315 N 0.000
ST18 Macaca mulatta ENSMMUG00000008439 N 0.000
MYT1L Macaca mulatta ENSMMUG00000009310 I 0.000
MYT1 Meleagris gallopavo ENSMGAG00000006569 N 0.000
MYT1L Meleagris gallopavo ENSMGAG00000013972 N 0.000
MYT1 Microcebus murinus ENSMICG00000003327 N 0.000
ST18 Monodelphis domestica ENSMODG00000009635 N 0.000
MYT1L Monodelphis domestica ENSMODG00000014378 N 0.000
MYT1 Monodelphis domestica ENSMODG00000017076 N 0.000
ENSMPUG00000006922 Mustela putorius furo ENSMPUG00000006922 N 0.000
ENSMPUG00000008741 Mustela putorius furo ENSMPUG00000008741 N 0.000
ENSMPUG00000012946 Mustela putorius furo ENSMPUG00000012946 N 0.000
Myt1 Mus musculus ENSMUSG00000010505 N 0.000
St18 Mus musculus ENSMUSG00000033740 N 0.000
Myt1l Mus musculus ENSMUSG00000061911 N 0.000
Myotis_brandtii_MYT1_10023423 Myotis brandtii Myotis_brandtii_MYT1_10023423 N 0.000
Myotis_brandtii_MYT1L_10020908 Myotis brandtii Myotis_brandtii_MYT1L_10020908 N 0.000
Myotis_brandtii_ST18_10012485 Myotis brandtii Myotis_brandtii_ST18_10012485 N 0.000
MYT1 Myotis lucifugus ENSMLUG00000007626 N 0.000
MYT1L Myotis lucifugus ENSMLUG00000012642 N 0.000
ST18 Myotis lucifugus ENSMLUG00000013211 N 0.000
NV11201 Nasonia vitripennis NV11201 N 0.000
ENSNLEG00000000678 Nomascus leucogenys ENSNLEG00000000678 N 0.000
ENSNLEG00000008466 Nomascus leucogenys ENSNLEG00000008466 N 0.000
ENSNLEG00000010244 Nomascus leucogenys ENSNLEG00000010244 N 0.000
ST18 Ochotona princeps ENSOPRG00000001335 N 0.000
MYT1L Ochotona princeps ENSOPRG00000007706 N 0.000
Ogr14932 Ophisaurus gracilis Ogr14932 N 0.000
ENSONIG00000000499 Oreochromis niloticus ENSONIG00000000499 N 0.000
ENSONIG00000009529 Oreochromis niloticus ENSONIG00000009529 N 0.000
ENSONIG00000011639 Oreochromis niloticus ENSONIG00000011639 N 0.000
ENSONIG00000011665 Oreochromis niloticus ENSONIG00000011665 N 0.000
ENSONIG00000018694 Oreochromis niloticus ENSONIG00000018694 N 0.000
MYT1 Ornithorhynchus anatinus ENSOANG00000004914 N 0.000
ST18 Ornithorhynchus anatinus ENSOANG00000007275 N 0.000
ENSOANG00000009861 Ornithorhynchus anatinus ENSOANG00000009861 N 0.000
ST18 Oryctolagus cuniculus ENSOCUG00000013284 N 0.000
MYT1L Oryctolagus cuniculus ENSOCUG00000016764 N 0.000
MYT1 Oryctolagus cuniculus ENSOCUG00000024866 N 0.000
myt1b Oryzias latipes ENSORLG00000002252 N 0.000
MYT1L Oryzias latipes ENSORLG00000017852 N 0.000
myt1la Oryzias latipes ENSORLG00000018130 N 0.000
myt1a Oryzias latipes ENSORLG00000020139 N 0.000
MYT1L Otolemur garnettii ENSOGAG00000010219 N 0.000
MYT1 Otolemur garnettii ENSOGAG00000011473 N 0.000
ST18 Otolemur garnettii ENSOGAG00000012050 N 0.000
ENSOARG00000007966 Ovis aries ENSOARG00000007966 N 0.000
ENSOARG00000013407 Ovis aries ENSOARG00000013407 N 0.000
MYT1L Pan troglodytes ENSPTRG00000011611 N 0.000
ST18 Pan troglodytes ENSPTRG00000020245 N 0.000
MYT1 Pan troglodytes ENSPTRG00000032477 N 0.000
ENSPANG00000005639 Papio anubis ENSPANG00000005639 N 0.000
ENSPANG00000005908 Papio anubis ENSPANG00000005908 N 0.000
ENSPANG00000009233 Papio anubis ENSPANG00000009233 N 0.000
ENSPSIG00000005126 Pelodiscus sinensis ENSPSIG00000005126 N 0.000
ENSPSIG00000010265 Pelodiscus sinensis ENSPSIG00000010265 N 0.000
ENSPSIG00000011125 Pelodiscus sinensis ENSPSIG00000011125 N 0.000
ENSPFOG00000002613 Poecilia formosa ENSPFOG00000002613 N 0.000
ENSPFOG00000005354 Poecilia formosa ENSPFOG00000005354 N 0.000
ENSPFOG00000014046 Poecilia formosa ENSPFOG00000014046 N 0.000
ENSPFOG00000016047 Poecilia formosa ENSPFOG00000016047 N 0.000
ENSPFOG00000017045 Poecilia formosa ENSPFOG00000017045 N 0.000
Pvit_03612 Pogona vitticeps Pvit_03612 N 0.000
Pvit_15314 Pogona vitticeps Pvit_15314 N 0.000
ENSPPYG00000011263 Pongo abelii ENSPPYG00000011263 N 0.000
ENSPPYG00000012686 Pongo abelii ENSPPYG00000012686 N 0.000
MYT1L Procavia capensis ENSPCAG00000015124 N 0.000
ST18 Pteropus vampyrus ENSPVAG00000013501 N 0.000
MYT1 Pteropus vampyrus ENSPVAG00000017398 N 0.000
Myt1l Rattus norvegicus ENSRNOG00000004269 N 0.000
St18 Rattus norvegicus ENSRNOG00000006200 N 0.000
Myt1 Rattus norvegicus ENSRNOG00000017346 N 0.000
Sakowv30043989m.g Saccoglossus kowalevskii Sakowv30043989m.g N 0.000
ENSSHAG00000012193 Sarcophilus harrisii ENSSHAG00000012193 N 0.000
ENSSHAG00000015142 Sarcophilus harrisii ENSSHAG00000015142 N 0.000
ENSSHAG00000015433 Sarcophilus harrisii ENSSHAG00000015433 N 0.000
MYT1L Sorex araneus ENSSARG00000012319 N 0.000
ST18 Sus scrofa ENSSSCG00000006266 N 0.000
MYT1L Sus scrofa ENSSSCG00000029334 N 0.000
ENSTGUG00000007315 Taeniopygia guttata ENSTGUG00000007315 N 0.000
ST18 Taeniopygia guttata ENSTGUG00000010944 N 0.000
ENSTGUG00000012971 Taeniopygia guttata ENSTGUG00000012971 N 0.000
MYT1 Takifugu rubripes ENSTRUG00000002124 N 0.000
MYT1L Takifugu rubripes ENSTRUG00000003414 N 0.000
ST18 Takifugu rubripes ENSTRUG00000006078 N 0.000
myt1a Takifugu rubripes ENSTRUG00000007068 N 0.000
myt1la Takifugu rubripes ENSTRUG00000015790 N 0.000
ENSTSYG00000006016 Tarsius syrichta ENSTSYG00000006016 N 0.000
ENSTSYG00000008880 Tarsius syrichta ENSTSYG00000008880 N 0.000
ENSTSYG00000010425 Tarsius syrichta ENSTSYG00000010425 N 0.000
myt1b Tetraodon nigroviridis ENSTNIG00000003105 N 0.000
ENSTNIG00000004354 Tetraodon nigroviridis ENSTNIG00000004354 N 0.000
ST18 Tetraodon nigroviridis ENSTNIG00000008501 N 0.000
myt1la Tetraodon nigroviridis ENSTNIG00000010716 N 0.000
MYT1L Tursiops truncatus ENSTTRG00000008589 N 0.000
MYT1 Tursiops truncatus ENSTTRG00000013408 N 0.000
ST18 Tursiops truncatus ENSTTRG00000015387 N 0.000
Tal_R003131 Tyto alba Tal_R003131 N 0.000
AAI70264 Xenopus laevis AAI70264 N 0.000
myt1.S Xenopus laevis XB-GENE-1009978 N 0.000
XP_002934158 Xenopus tropicalis XP_002934158 N 0.000
XP_002936343 Xenopus tropicalis XP_002936343 N 0.000
XP_002942428 Xenopus tropicalis XP_002942428 N 0.000
ENSXMAG00000002367 Xiphophorus maculatus ENSXMAG00000002367 N 0.000
ENSXMAG00000004301 Xiphophorus maculatus ENSXMAG00000004301 N 0.000
ENSXMAG00000012857 Xiphophorus maculatus ENSXMAG00000012857 N 0.000
ENSXMAG00000018975 Xiphophorus maculatus ENSXMAG00000018975 N 0.000
L798_00492 Zootermopsis nevadensis L798_00492 N 0.000