CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm028040
(
Prunus mume
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
Pm028040
T344566_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm028040
TCP
39
104
RRYIDKHSTVNGRHRRVRIPVTCCPGIFRLTQELGHRSDGDTIQWLLSQVRPELVLPPQPNNRTRR
Links
Other
TCP
family TFs
Other
Prunus mume
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.A01143
Eucalyptus grandis
Eucgr.A01143
I
0.863
Gorai.009G398700
Gossypium raimondii
Gorai.009G398700
I
0.893
OB01G51240
Oryza brachyantha
OB01G51240
I
0.836
OMERI02G02280
Oryza meridionalis
OMERI02G02280
I
0.834
POPTR_0009s01480
Populus trichocarpa
POPTR_0009s01480
I
0.838
PRUPE_ppa025069mg
Prunus persica
PRUPE_ppa025069mg
N
0.962
Sb08g021725
Sorghum bicolor
Sb08g021725
I
0.828
TCM_022798
Theobroma cacao
TCM_022798
I
0.887