CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VHR2
(
Saccharomyces cerevisiae
)
VHR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04001 (Vhr1)
IPR007147
YER064C
T350444_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VHR2
M00917_2.00
Saccharomyces cerevisiae
NRTGACTCAN
NTGAGTCAYN
PBM
Gordan et al.(2011)
Vhr2
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VHR1
M08640_2.00
Saccharomyces cerevisiae
TCANNNNNNNNTGATT
AATCANNNNNNNNTGA
Misc
DeBoer et al.(2011)
YIL056W_1325
0.802
0.802
For this family, TFs with SR scores >
0.700
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00917_2.00
VHR1
22
112
TGYGTTHKIRAQLNFNDEKKWKKFSSRRLELIDSFGLSQHKASEQDDNIRQIATILRSEFEYPDTFSAEFEKLVTAAVQSVRRNRKRSKKK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
YER064C
VHR1
22
112
TGYGTTHKIRAQLNFNDEKKWKKFSSRRLELIDSFGLSQHKASEQDDNIRQIATILRSEFEYPDTFSAEFEKLVTAAVQSVRRNRKRSKKK
Links
Other
VHR1
family TFs
Other
Saccharomyces cerevisiae
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG020461.1
Alligator sinensis
Alligator_sinensis_CCG020461.1
I
0.000
ACHR008952
Anopheles christyi
ACHR008952
I
0.000
AEPI008594
Anopheles epiroticus
AEPI008594
I
0.000
AGAP000512
Anopheles gambiae
AGAP000512
I
0.000
BGIBMGA001129
Bombyx mori
BGIBMGA001129
I
0.000
e_gw.291.69.1
Branchiostoma floridae
e_gw.291.69.1
I
0.000
CBG02541
Caenorhabditis briggsae
CBG02541
I
0.000
egl-44
Caenorhabditis elegans
WBGene00001208
I
0.000
TEAD3
Canis familiaris
ENSCAFG00000001326
I
0.000
ENSCING00000019408
Ciona intestinalis
ENSCING00000019408
I
0.000
ENSCSAVG00000007634
Ciona savignyi
ENSCSAVG00000007634
I
0.000
CpipJ_CPIJ013490
Culex pipiens
CpipJ_CPIJ013490
I
0.000
CPIJ013490
Culex quinquefasciatus
CPIJ013490
I
0.000
tead1b
Danio rerio
ENSDARG00000059483
I
0.000
tead1a
Danio rerio
ENSDARG00000028159
I
0.000
Tead3
Dipodomys ordii
ENSDORG00000010798
I
0.000
ECANG7_01760
Echinococcus canadensis
ECANG7_01760
I
0.000
TEAD3
Equus caballus
ENSECAG00000015056
I
0.000
TEAD3
Felis catus
ENSFCAG00000012905
I
0.000
ENSFALG00000003635
Ficedula albicollis
ENSFALG00000003635
I
0.000
ENSGMOG00000015271
Gadus morhua
ENSGMOG00000015271
I
0.000
ENSGALG00000000953
Gallus gallus
ENSGALG00000000953
I
0.000
tead3a
Gasterosteus aculeatus
ENSGACG00000009758
I
0.000
tead1b
Gasterosteus aculeatus
ENSGACG00000015715
I
0.000
TEAD3
Gorilla gorilla
ENSGGOG00000001847
I
0.000
HHAL001589-PA
Halyomorpha halys
HHAL001589-PA
I
0.000
TEAD4
Homo sapiens
ENSG00000197905
D
0.000
TEAD3
Homo sapiens
ENSG00000007866
D
0.000
ENSLACG00000016444
Latimeria chalumnae
ENSLACG00000016444
I
0.000
ENSLOCG00000009736
Lepisosteus oculatus
ENSLOCG00000009736
I
0.000
TEAD3
Loxodonta africana
ENSLAFG00000014818
I
0.000
TEAD3
Macaca mulatta
ENSMMUG00000015909
I
0.000
TEAD4
Meleagris gallopavo
ENSMGAG00000013910
I
0.000
TEAD2
Microcebus murinus
ENSMICG00000009284
I
0.000
TEAD1
Microcebus murinus
ENSMICG00000007178
I
0.000
TEAD3
Microcebus murinus
ENSMICG00000000029
I
0.000
Tead4
Mus musculus
ENSMUSG00000030353
D
0.000
NEMVEDRAFT_v1g86806
Nematostella vectensis
NEMVEDRAFT_v1g86806
I
0.000
NBR_0001654801
Nippostrongylus brasiliensis
NBR_0001654801
I
0.000
NBR_0002152001
Nippostrongylus brasiliensis
NBR_0002152001
I
0.000
ENSONIG00000011013
Oreochromis niloticus
ENSONIG00000011013
I
0.000
TEAD4
Oryzias latipes
ENSORLG00000002553
I
0.000
TEAD3
Otolemur garnettii
ENSOGAG00000002943
I
0.000
ENSOARG00000012126
Ovis aries
ENSOARG00000012126
I
0.000
TEAD3
Pan troglodytes
ENSPTRG00000018086
I
0.000
ENSPSIG00000006176
Pelodiscus sinensis
ENSPSIG00000006176
I
0.000
PPAI001408
Phlebotomus papatasi
PPAI001408
I
0.000
ENSPFOG00000003170
Poecilia formosa
ENSPFOG00000003170
I
0.000
ENSPFOG00000013997
Poecilia formosa
ENSPFOG00000013997
I
0.000
Pvit_05988
Pogona vitticeps
Pvit_05988
I
0.000
TEAD3
Pteropus vampyrus
ENSPVAG00000002764
I
0.000
SMAR011013
Strigamia maritima
SMAR011013
I
0.000
TsM_000210300
Taenia solium
TsM_000210300
I
0.000
TEAD3
Taeniopygia guttata
ENSTGUG00000001691
I
0.000
tead1a
Takifugu rubripes
ENSTRUG00000005940
I
0.000
tead3a
Takifugu rubripes
ENSTRUG00000011546
I
0.000
TEAD4
Takifugu rubripes
ENSTRUG00000016489
I
0.000
tead3a
Tetraodon nigroviridis
ENSTNIG00000015031
I
0.000
EFV53558
Trichinella spiralis
EFV53558
I
0.000
D918_02241
Trichuris suis
D918_02241
I
0.000
TEAD3
Tursiops truncatus
ENSTTRG00000009434
I
0.000
TEAD2
Tursiops truncatus
ENSTTRG00000005361
I
0.000