SAKL0F08734g (Lachancea kluyveri)
VHR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04001 (Vhr1) IPR007147 SAKL0F08734g T350463_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VHR2
M00917_2.00 		Saccharomyces cerevisiae
NRTGACTCAN
NTGAGTCAYN		 PBM
Gordan et al.(2011)
Vhr2 		0.813 0.813
VHR1
M08640_2.00 		Saccharomyces cerevisiae
TCANNNNNNNNTGATT
AATCANNNNNNNNTGA		 Misc
DeBoer et al.(2011)
YIL056W_1325 		0.802 0.802
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SAKL0F08734g VHR1 17 107

Links

Other VHR1 family TFs
Other Lachancea kluyveri TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J22474 Panicum virgatum Pavir.J22474 N 0.000
Pavir.J07161 Panicum virgatum Pavir.J07161 N 0.000
Pavir.J05000 Panicum virgatum Pavir.J05000 N 0.000
Pavir.Ib02466 Panicum virgatum Pavir.Ib02466 N 0.000
Pavir.Ga01170 Panicum virgatum Pavir.Ga01170 N 0.000
Pavir.Ea01242 Panicum virgatum Pavir.Ea01242 N 0.000
Pavir.Db01105 Panicum virgatum Pavir.Db01105 N 0.000
Sb05g007130 Sorghum bicolor Sb05g007130 N 0.000
Sb08g002650 Sorghum bicolor Sb08g002650 N 0.000
Sb01g017605 Sorghum bicolor Sb01g017605 N 0.000
Sb03g047180 Sorghum bicolor Sb03g047180 N 0.000
Sb03g031563 Sorghum bicolor Sb03g031563 N 0.000
Sb03g011600 Sorghum bicolor Sb03g011600 N 0.000
Sb02g028930 Sorghum bicolor Sb02g028930 N 0.000
Sb02g027384 Sorghum bicolor Sb02g027384 N 0.000
Sb02g007217 Sorghum bicolor Sb02g007217 N 0.000
Sb02g005860 Sorghum bicolor Sb02g005860 N 0.000
Sb02g005850 Sorghum bicolor Sb02g005850 N 0.000
Traes_5BL_FC8AB1380 Triticum aestivum Traes_5BL_FC8AB1380 N 0.000