Pavir.J14128 (Panicum virgatum)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 Pavir.J14128 T351741_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtGRF6
M02545_2.00 		Arabidopsis thaliana
NNNNYDNN
NNHRNNNN		 PBM
Weirauch et al.(2014)
pTH7356 		0.837 0.837
AtGRF6
M07369_2.00 		Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN		 Dap-seq
OMalley et al.(2016)
AtGRF6_col_a 		0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J14128.1.p WRC 90 132

Links

Other WRC family TFs
Other Panicum virgatum TFs

552 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000007291 Ailuropoda melanoleuca ENSAMEG00000007291 N
Alligator_sinensis_CCG014295.1 Alligator sinensis Alligator_sinensis_CCG014295.1 N
ENSAPLG00000006642 Anas platyrhynchos ENSAPLG00000006642 N
ZNF362 Anolis carolinensis ENSACAG00000008279 N
ENSAMXG00000015158 Astyanax mexicanus ENSAMXG00000015158 N
ENSAMXG00000003703 Astyanax mexicanus ENSAMXG00000003703 N
ENSBTAP00000016763-D1 Bos grunniens ENSBTAP00000016763-D1 N
ZNF362 Bos taurus ENSBTAG00000012629 N
ZNF362 Callithrix jacchus ENSCJAG00000001133 N
ZNF362 Canis familiaris ENSCAFG00000023543 N
ZNF362 Cavia porcellus ENSCPOG00000021888 N
Cmyd_10007696 Chelonia mydas Cmyd_10007696 N
ENSCSAG00000001071 Chlorocebus sabaeus ENSCSAG00000001071 N
znf362a Danio rerio ENSDARG00000060900 N
znf362b Danio rerio ENSDARG00000062231 N
Zfp362 Dipodomys ordii ENSDORG00000012437 N
ZNF362 Equus caballus ENSECAG00000021304 N
ZNF362 Erinaceus europaeus ENSEEUG00000013897 N
ZNF362 Felis catus ENSFCAG00000029727 N
ENSFALG00000003819 Ficedula albicollis ENSFALG00000003819 N
ENSGMOG00000016038 Gadus morhua ENSGMOG00000016038 N
ZNF362 Gallus gallus ENSGALG00000026558 N
znf362b Gasterosteus aculeatus ENSGACG00000006798 N
ZNF362 Gorilla gorilla ENSGGOG00000001965 N
ZNF362 Homo sapiens ENSG00000160094 N
ENSSTOG00000020462 Ictidomys tridecemlineatus ENSSTOG00000020462 N
ENSLACG00000004509 Latimeria chalumnae ENSLACG00000004509 N
ENSLOCG00000001262 Lepisosteus oculatus ENSLOCG00000001262 N
ZNF362 Loxodonta africana ENSLAFG00000003524 N
ENSP00000362527 Macaca fascicularis ENSP00000362527 N
ZNF362 Macaca mulatta ENSMMUG00000003267 N
ENSMICG00000012475 Microcebus murinus ENSMICG00000012475 N
ZNF362 Monodelphis domestica ENSMODG00000017096 N
ENSMPUG00000015089 Mustela putorius furo ENSMPUG00000015089 N
Zfp362 Mus musculus ENSMUSG00000028799 N
Myotis_brandtii_ZNF362_10012408 Myotis brandtii Myotis_brandtii_ZNF362_10012408 N
ZNF362 Myotis lucifugus ENSMLUG00000000806 N
Ogr07132 Ophisaurus gracilis Ogr07132 N
ENSONIG00000004076 Oreochromis niloticus ENSONIG00000004076 N
ENSONIG00000002181 Oreochromis niloticus ENSONIG00000002181 N
ZNF362 Oryctolagus cuniculus ENSOCUG00000012456 N
znf362b Oryzias latipes ENSORLG00000004688 N
ZNF362 Otolemur garnettii ENSOGAG00000007333 N
ZNF362 Pan troglodytes ENSPTRG00000000503 N
ENSPANG00000010244 Papio anubis ENSPANG00000010244 N
ENSPFOG00000014429 Poecilia formosa ENSPFOG00000014429 N
ENSPFOG00000008905 Poecilia formosa ENSPFOG00000008905 N
Pvit_10032 Pogona vitticeps Pvit_10032 N
ENSPPYG00000001575 Pongo abelii ENSPPYG00000001575 N
ZNF362 Pteropus vampyrus ENSPVAG00000015027 N
Zfp362 Rattus norvegicus ENSRNOG00000043364 N
znf362b Takifugu rubripes ENSTRUG00000014263 N
znf362b Tetraodon nigroviridis ENSTNIG00000019373 N
znf362 Xenopus tropicalis XB-GENE-5793620 N
ENSXMAG00000017122 Xiphophorus maculatus ENSXMAG00000017122 N
ENSXMAG00000016683 Xiphophorus maculatus ENSXMAG00000016683 N