Bra002421 (Brassica rapa)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 Bra002421 T352231_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.863 0.814
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.841 0.644
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.833 0.627
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra002421.1-P WRKY 105 165

Links

Other WRKY family TFs
Other Brassica rapa TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.810
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.829
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.841
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.824
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.863
WRKY67 Arabidopsis thaliana AT1G66550 I 0.828
WRKY64 Arabidopsis thaliana AT1G66560 I 0.840
WRKY63 Arabidopsis thaliana AT1G66600 D 0.833
WRKY66 Arabidopsis thaliana AT1G80590 I 0.825
WRKY62 Arabidopsis thaliana AT5G01900 D 0.841
WRKY38 Arabidopsis thaliana AT5G22570 D 0.863
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.826
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.817
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.853
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.821
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.836
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I 0.809
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.834
Bo01002s040 Brassica oleracea Bo01002s040 I 0.893
Bo2g024040 Brassica oleracea Bo2g024040 I 0.866
Bo2g095820 Brassica oleracea Bo2g095820 I 0.815
Bo5g068250 Brassica oleracea Bo5g068250 I 0.833
Bra008454 Brassica rapa Bra008454 I 0.816
Bra008459 Brassica rapa Bra008459 I 0.815
Bra020196 Brassica rapa Bra020196 I 0.866
Bra020197 Brassica rapa Bra020197 I 0.866
Bra023211 Brassica rapa Bra023211 I 0.833
Bra028918 Brassica rapa Bra028918 I 0.844
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.830
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.832
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.864
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.864
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.830
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.832
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.827
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.835
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.829
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.812
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.819
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.816
Ca_12915 Cicer arietinum Ca_12915 I 0.825
Ca_18932 Cicer arietinum Ca_18932 I 0.832
Cla018337 Citrullus lanatus Cla018337 I 0.824
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.817
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.827
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.814
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.844
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.855
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I 0.810
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.819
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.814
GLYMA13G34240 Glycine max GLYMA13G34240 I 0.810
GLYMA13G34251 Glycine max GLYMA13G34251 I 0.812
GLYMA13G34261 Glycine max GLYMA13G34261 I 0.815
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.821
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.816
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.811
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I 0.812
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.814
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.810
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.811
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.811
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I 0.820
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.836
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.826
MTR_2g075690 Medicago truncatula MTR_2g075690 I 0.822
MTR_2g075700 Medicago truncatula MTR_2g075700 I 0.819
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.836
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.810
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.835
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.816
OBART03G16400 Oryza barthii OBART03G16400 I 0.815
OBART05G20330 Oryza barthii OBART05G20330 I 0.817
OB05G17240 Oryza brachyantha OB05G17240 I 0.811
OB05G27850 Oryza brachyantha OB05G27850 I 0.819
ORGLA05G0177400 Oryza glaberrima ORGLA05G0177400 I 0.817
OGLUM03G16780 Oryza glumaepatula OGLUM03G16780 I 0.815
OGLUM05G21440 Oryza glumaepatula OGLUM05G21440 I 0.817
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I 0.809
OGLUM05G21510 Oryza glumaepatula OGLUM05G21510 I 0.817
BGIOSGA012571 Oryza indica BGIOSGA012571 I 0.815
BGIOSGA017860 Oryza indica BGIOSGA017860 I 0.811
OLONG_024544 Oryza longistaminata OLONG_024544 I 0.815
OLONG_027124 Oryza longistaminata OLONG_027124 I 0.809
OMERI03G14670 Oryza meridionalis OMERI03G14670 I 0.815
OMERI05G18250 Oryza meridionalis OMERI05G18250 I 0.811
ONIVA03G17390 Oryza nivara ONIVA03G17390 I 0.815
ONIVA05G21460 Oryza nivara ONIVA05G21460 I 0.811
OPUNC05G18000 Oryza punctata OPUNC05G18000 I 0.819
OPUNC05G18030 Oryza punctata OPUNC05G18030 I 0.813
ORUFI03G16960 Oryza rufipogon ORUFI03G16960 I 0.815
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I 0.811
OS03G0335200 Oryza sativa OS03G0335200 I 0.815
OS05G0478800 Oryza sativa OS05G0478800 I 0.811
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.816
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I 0.811
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.818
Pm003014 Prunus mume Pm003014 I 0.812
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.812
29729.m002369 Ricinus communis 29729.m002369 I 0.809
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.814
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.808
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.808
Si025181m.g Setaria italica Si025181m.g I 0.813
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.822
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.828
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I 0.818
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.822
TCM_019689 Theobroma cacao TCM_019689 I 0.812