PGSC0003DMG400008391 (Solanum tuberosum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 PGSC0003DMG400008391 T354250_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.828 0.627
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.813 0.542
WRKY55
M07392_2.00 		Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD		 Dap-seq
OMalley et al.(2016)
WRKY55_col_a 		0.808 0.576
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400021625 WRKY 105 165

Links

Other WRKY family TFs
Other Solanum tuberosum TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_500470.1 Arabidopsis lyrata scaffold_500470.1 I 0.000
fgenesh2_kg.2__1107__AT1G68550.2 Arabidopsis lyrata fgenesh2_kg.2__1107__AT1G68550.2 I 0.000
ERF119 Arabidopsis thaliana AT3G25890 D 0.000
ERF118 Arabidopsis thaliana AT1G68550 D 0.000
Bostr.0556s0264 Boechera stricta Bostr.0556s0264 I 0.000
Bostr.13158s0163 Boechera stricta Bostr.13158s0163 I 0.000
Bostr.26959s0035 Boechera stricta Bostr.26959s0035 I 0.000
Bo7g082250 Brassica oleracea Bo7g082250 I 0.000
Bo2g138790 Brassica oleracea Bo2g138790 I 0.000
Bra036360 Brassica rapa Bra036360 I 0.000
Bra025170 Brassica rapa Bra025170 I 0.000
PK24580.1 Cannabis sativa PK24580.1 D 0.000
Cagra.0483s0087 Capsella grandiflora Cagra.0483s0087 I 0.000
Cagra.3364s0010 Capsella grandiflora Cagra.3364s0010 I 0.000
Cagra.6197s0021 Capsella grandiflora Cagra.6197s0021 I 0.000
Carubv10017565m.g Capsella rubella Carubv10017565m.g I 0.000
Carubv10017705m.g Capsella rubella Carubv10017705m.g I 0.000
Carubv10021988m.g Capsella rubella Carubv10021988m.g I 0.000
evm.TU.supercontig_1.178 Carica papaya evm.TU.supercontig_1.178 I 0.000
Ca_05485 Cicer arietinum Ca_05485 I 0.000
Cla008128 Citrullus lanatus Cla008128 I 0.000
Cla021763 Citrullus lanatus Cla021763 I 0.000
Cucsa.365320 Cucumis sativus Cucsa.365320 I 0.000
Cucsa.256230 Cucumis sativus Cucsa.256230 I 0.000
Eucgr.G02326 Eucalyptus grandis Eucgr.G02326 I 0.000
Thhalv10019722m.g Eutrema salsugineum Thhalv10019722m.g I 0.000
Thhalv10004526m.g Eutrema salsugineum Thhalv10004526m.g I 0.000
GLYMA01G20383 Glycine max GLYMA01G20383 I 0.000
GLYMA08G15830 Glycine max GLYMA08G15830 I 0.000
GLYMA20G24920 Glycine max GLYMA20G24920 I 0.000
GLYMA10G42130 Glycine max GLYMA10G42130 I 0.000
GLYMA08G30716 Glycine max GLYMA08G30716 I 0.000
Gorai.008G183300 Gossypium raimondii Gorai.008G183300 I 0.000
Lus10034316.g Linum usitatissimum Lus10034316.g I 0.000
Lus10021678.g Linum usitatissimum Lus10021678.g I 0.000
LjSGA_132504.1 Lotus japonicus LjSGA_132504.1 I 0.000
LjSGA_016572.1 Lotus japonicus LjSGA_016572.1 I 0.000
chr6.LjT13N05.60.nc Lotus japonicus chr6.LjT13N05.60.nc I 0.000
chr2.CM0903.260.nd Lotus japonicus chr2.CM0903.260.nd I 0.000
MDP0000119956 Malus domestica MDP0000119956 I 0.000
MDP0000743350 Malus domestica MDP0000743350 I 0.000
cassava43300.valid.m1 Manihot esculenta cassava43300.valid.m1 I 0.000
cassava35758.valid.m1 Manihot esculenta cassava35758.valid.m1 I 0.000
cassava35757.valid.m1 Manihot esculenta cassava35757.valid.m1 I 0.000
mgf006610m Mimulus guttatus mgf006610m I 0.000
GSMUA_Achr5G26850_001 Musa acuminata GSMUA_Achr5G26850_001 I 0.000
POPTR_0008s11900 Populus trichocarpa POPTR_0008s11900 I 0.000
POPTR_0010s13540 Populus trichocarpa POPTR_0010s13540 I 0.000
27524.m000298 Ricinus communis 27524.m000298 I 0.000
SapurV1A.0078s0470 Salix purpurea SapurV1A.0078s0470 I 0.000
SapurV1A.0079s0190 Salix purpurea SapurV1A.0079s0190 I 0.000
Solyc04g007180.1 Solanum lycopersicum Solyc04g007180.1 I 0.000
PGSC0003DMG400015880 Solanum tuberosum PGSC0003DMG400015880 I 0.000
TCM_011811 Theobroma cacao TCM_011811 I 0.000
VIT_01s0011g03470 Vitis vinifera VIT_01s0011g03470 I 0.000