CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g041468m.g
(
Citrus sinensis
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
orange1.1g041468m.g
T356666_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY55
M07392_2.00
Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD
Dap-seq
OMalley et al.(2016)
WRKY55_col_a
0.818
0.542
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g041468m
WRKY
26
86
DDGYTWRKYGQKEILGSKFPRIARGATTDIRMDALQGKKLQQLSDDPVSFEITYHGEHTCQ
Links
Other
WRKY
family TFs
Other
Citrus sinensis
TFs
77 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPPYG00000005154
Pongo abelii
ENSPPYG00000005154
N
ENSPCAG00000011436
Procavia capensis
ENSPCAG00000011436
N
ENSPVAG00000014538
Pteropus vampyrus
ENSPVAG00000014538
N
ENSTSYG00000013798
Tarsius syrichta
ENSTSYG00000013798
N