CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CPC735_009030
(
Coccidioides posadasii
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CPC735_009030
T365596_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_00835
M01344_2.00
Aspergillus nidulans
DTCCGGAA
TTCCGGAH
PBM
Lambert et al.(2019)
pEX0389
0.552
0.711
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EER26727
Zinc cluster
58
95
KACDRCRVKKTKCDGNQPCYRCASYNHPCLFRERKVTQ
Links
Other
Zinc cluster
family TFs
Other
Coccidioides posadasii
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Eb02083
Panicum virgatum
Pavir.Eb02083
N
Pavir.J10053
Panicum virgatum
Pavir.J10053
N
Pavir.J19504
Panicum virgatum
Pavir.J19504
N
Pavir.J32900
Panicum virgatum
Pavir.J32900
N