CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EURHEDRAFT_400952
(
Aspergillus ruber
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
EURHEDRAFT_400952
T366771_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
UPC2
M00920_2.00
Saccharomyces cerevisiae
NTCGTWYVN
NBRWACGAN
PBM
Gordan et al.(2011)
Upc2
0.558
0.525
UPC2
M07508_2.00
Saccharomyces cerevisiae
NRWACGA
TCGTWYN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0411.1
0.558
0.525
UPC2
M08654_2.00
Saccharomyces cerevisiae
NRWACGA
TCGTWYN
Misc
DeBoer et al.(2011)
YDR213W_544
0.558
0.525
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EYE97199
Zinc cluster
14
53
NGCDQCKKRRVKCDEKGPPCSNCTSRQLECTYLKIPRARE
Links
Other
Zinc cluster
family TFs
Other
Aspergillus ruber
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MCYG_04120
Arthroderma otae
MCYG_04120
N
0.552
fgenesh1_pm.00083_#_70
Aspergillus carbonarius
fgenesh1_pm.00083_#_70
N
0.603
EURHEDRAFT_411825
Aspergillus ruber
EURHEDRAFT_411825
N
0.544
CIMG_10125
Coccidioides immitis
CIMG_10125
N
0.552
CPC735_012430
Coccidioides posadasii
CPC735_012430
N
0.552
MCYG_04120
Microsporum canis
MCYG_04120
N
0.552
MGYG_02491
Microsporum gypseum
MGYG_02491
N
0.567
Pc16g02960
Penicillium chrysogenum
Pc16g02960
N
0.576
PDIP_40890
Penicillium digitatum
PDIP_40890
N
0.590
PEX1_058640
Penicillium expansum
PEX1_058640
N
0.590
PITC_053160
Penicillium italicum
PITC_053160
N
0.590
PDE_08065
Penicillium oxalicum
PDE_08065
N
0.586
PCH_Pc16g02960
Penicillium rubens
PCH_Pc16g02960
N
0.576
U727_00433740401
Penicillium solitum
U727_00433740401
N
0.541
U727_00434375101
Penicillium solitum
U727_00434375101
N
0.576
SU7_2615
Saccharomyces arboricola
SU7_2615
I
0.558
4515_Multiple
Saccharomyces bayanus
4515_Multiple
I
0.558
UPC2
Saccharomyces cerevisiae
YDR213W
D
0.558
4123_Multiple
Saccharomyces mikatae
4123_Multiple
I
0.558
4533_YDR213W
Saccharomyces paradoxus
4533_YDR213W
I
0.558
TEQG_07934
Trichophyton equinum
TEQG_07934
N
0.567
H101_06724
Trichophyton interdigitale
H101_06724
N
0.567
TESG_07322
Trichophyton tonsurans
TESG_07322
N
0.567