CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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H105_07898
(
Trichophyton soudanense
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
H105_07898
T370490_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
vad-3
M02614_2.00
Neurospora crassa
NNNCGGCANWT
AWNTGCCGNNN
PBM
Weirauch et al.(2014)
pTH7811
0.595
0.923
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EZF69666
Zinc cluster
165
203
LACIVCRRKKIRCSGEKPACKHCYRSRIPCVYKVTTRKA
EZF69667
Zinc cluster
164
202
LACIVCRRKKIRCSGEKPACKHCYRSRIPCVYKVTTRKA
Links
Other
Zinc cluster
family TFs
Other
Trichophyton soudanense
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_17.185
Carica papaya
evm.TU.supercontig_17.185
N
Ca_15323
Cicer arietinum
Ca_15323
N
Ciclev10021399m.g
Citrus clementina
Ciclev10021399m.g
N
gene09561-v1.0-hybrid
Fragaria vesca
gene09561-v1.0-hybrid
N
Gorai.007G034800
Gossypium raimondii
Gorai.007G034800
N
Gorai.003G070700
Gossypium raimondii
Gorai.003G070700
N
MDP0000216231
Malus domestica
MDP0000216231
N
cassava19740.m1
Manihot esculenta
cassava19740.m1
N
cassava35156.m1
Manihot esculenta
cassava35156.m1
N
MTR_4g107450
Medicago truncatula
MTR_4g107450
N
POPTR_0012s07390
Populus trichocarpa
POPTR_0012s07390
N
POPTR_0015s07780
Populus trichocarpa
POPTR_0015s07780
N
Pm024623
Prunus mume
Pm024623
N
PRUPE_ppa025223mg
Prunus persica
PRUPE_ppa025223mg
N
30147.m014053
Ricinus communis
30147.m014053
N
SapurV1A.0161s0030
Salix purpurea
SapurV1A.0161s0030
N
Solyc03g113360.2
Solanum lycopersicum
Solyc03g113360.2
N
PGSC0003DMG400013182
Solanum tuberosum
PGSC0003DMG400013182
N
TCM_030184
Theobroma cacao
TCM_030184
N