CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MYCFIDRAFT_170117
(
Pseudocercospora fijiensis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
MYCFIDRAFT_170117
T375082_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
qa-1F
M11489_2.00
Neurospora crassa
HHGGNTAADBVYTYAWCCBB
VVGGWTRARBVHTTANCCDD
Transfac
Matys et al.(2006)
F$QA1F_01
0.614
0.718
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EME88512
Zinc cluster
55
93
RACDQCRAGREKCDGGQPLCQTCEVQRRSCTYHEQPKKR
Links
Other
Zinc cluster
family TFs
Other
Pseudocercospora fijiensis
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCVIDRAFT_27956
Bipolaris victoriae
COCVIDRAFT_27956
I
0.584
COCCADRAFT_5667
Bipolaris zeicola
COCCADRAFT_5667
I
0.584
PVAR5_3766
Byssochlamys spectabilis
PVAR5_3766
I
0.573
A1O1_04840
Capronia coronata
A1O1_04840
N
0.539
estExt_Genewise1Plus.C_50594
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_50594
I
0.584
GLRG_07125
Colletotrichum graminicola
GLRG_07125
I
0.584
W97_04550
Coniosporium apollinis
W97_04550
I
0.584
GGTG_00383
Gaeumannomyces graminis
GGTG_00383
I
0.592
LEMA_P062270.1
Leptosphaeria maculans
LEMA_P062270.1
I
0.584
MPH_01982
Macrophomina phaseolina
MPH_01982
I
0.584
MGG_07777
Magnaporthe oryzae
MGG_07777
I
0.584
MAPG_07478
Magnaporthe poae
MAPG_07478
I
0.592
MYCTH_2067244
Myceliophthora thermophila
MYCTH_2067244
I
0.584
fgenesh1_pg.C_scaffold_40000014
Mycosphaerella fijiensis
fgenesh1_pg.C_scaffold_40000014
I
0.683
UCRNP2_4108
Neofusicoccum parvum
UCRNP2_4108
I
0.584
qa-1F
Neurospora crassa
NCU06028
D
0.614
estExt_Genewise1.C_80993
Neurospora discreta
estExt_Genewise1.C_80993
I
0.591
NEUTE1DRAFT_147986
Neurospora tetrasperma
NEUTE1DRAFT_147986
I
0.614
OIDMADRAFT_52514
Oidiodendron maius
OIDMADRAFT_52514
I
0.559
F503_06755
Ophiostoma piceae uamh
F503_06755
I
0.584
PFICI_15081
Pestalotiopsis fici
PFICI_15081
I
0.570
PODANS_5_5100
Podospora anserina
PODANS_5_5100
I
0.614
PTT_06800
Pyrenophora teres
PTT_06800
I
0.584
SETTUDRAFT_140992
Setosphaeria turcica
SETTUDRAFT_140992
I
0.584
SMAC_07407
Sordaria macrospora
SMAC_07407
I
0.614
SEPMUDRAFT_150184
Sphaerulina musiva
SEPMUDRAFT_150184
I
0.557
SPBR_06572
Sporothrix brasiliensis
SPBR_06572
I
0.584
THITE_2116895
Thielavia terrestris
THITE_2116895
I
0.584
VDBG_08512
Verticillium albo atrum
VDBG_08512
I
0.584
VDBG_08512
Verticillium alfalfae
VDBG_08512
I
0.584
VDAG_08177
Verticillium dahliae
VDAG_08177
I
0.584