CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PFL1_03819
(
Pseudozyma flocculosa
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PFL1_03819
T378147_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPQ28516
Zinc cluster
183
236
RACDSCRRKKIRCDVIDDGGPPMANVNNGNGGLICAHCRQYGFECTFFLPITET
Links
Other
Zinc cluster
family TFs
Other
Pseudozyma flocculosa
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_014_00674
Aquilegia coerulea
Aquca_014_00674
N
SCL3
Arabidopsis lyrata
fgenesh2_kg.1__4122__AT1G50420.1
N
SCL3
Arabidopsis thaliana
AT1G50420
N
Bostr.26675s0133
Boechera stricta
Bostr.26675s0133
N
PK02707.1
Cannabis sativa
PK02707.1
N
Cagra.0860s0005
Capsella grandiflora
Cagra.0860s0005
N
Carubv10008999m.g
Capsella rubella
Carubv10008999m.g
N
evm.TU.supercontig_197.7
Carica papaya
evm.TU.supercontig_197.7
N
evm.TU.supercontig_84.12
Carica papaya
evm.TU.supercontig_84.12
N
Ca_11133
Cicer arietinum
Ca_11133
N
Ca_27441
Cicer arietinum
Ca_27441
N
Cla006433
Citrullus lanatus
Cla006433
N
Ciclev10031389m.g
Citrus clementina
Ciclev10031389m.g
N
Ciclev10015219m.g
Citrus clementina
Ciclev10015219m.g
N
orange1.1g011736m.g
Citrus sinensis
orange1.1g011736m.g
N
orange1.1g014413m.g
Citrus sinensis
orange1.1g014413m.g
N
Cucsa.055340
Cucumis sativus
Cucsa.055340
N
Eucgr.B03716
Eucalyptus grandis
Eucgr.B03716
N
Thhalv10011447m.g
Eutrema salsugineum
Thhalv10011447m.g
N
GLYMA12G02490
Glycine max
GLYMA12G02490
N
GLYMA11G10170
Glycine max
GLYMA11G10170
N
Gorai.006G125700
Gossypium raimondii
Gorai.006G125700
N
chr3.CM0460.90.nd
Lotus japonicus
chr3.CM0460.90.nd
N
chr2.CM0018.90.nc
Lotus japonicus
chr2.CM0018.90.nc
N
cassava20989.m1
Manihot esculenta
cassava20989.m1
N
cassava31043.valid.m1
Manihot esculenta
cassava31043.valid.m1
N
cassava1376.valid.m1
Manihot esculenta
cassava1376.valid.m1
N
cassava13860.valid.m1
Manihot esculenta
cassava13860.valid.m1
N
cassava1375.valid.m1
Manihot esculenta
cassava1375.valid.m1
N
MTR_4g076140
Medicago truncatula
MTR_4g076140
N
MTR_5g009080
Medicago truncatula
MTR_5g009080
N
mgf008315m
Mimulus guttatus
mgf008315m
N
mgf022906m
Mimulus guttatus
mgf022906m
N
SCL3
Populus trichocarpa
POPTR_0009s05330
N
POPTR_0001s06090
Populus trichocarpa
POPTR_0001s06090
N
Pm012190
Prunus mume
Pm012190
N
PRUPE_ppa005243mg
Prunus persica
PRUPE_ppa005243mg
N
30131.m007244
Ricinus communis
30131.m007244
N
30024.m001746
Ricinus communis
30024.m001746
N
SapurV1A.0009s0760
Salix purpurea
SapurV1A.0009s0760
N
SapurV1A.0415s0050
Salix purpurea
SapurV1A.0415s0050
N
SapurV1A.0504s0280
Salix purpurea
SapurV1A.0504s0280
N
Solyc12g099900.1
Solanum lycopersicum
Solyc12g099900.1
N
PGSC0003DMG400022709
Solanum tuberosum
PGSC0003DMG400022709
N
PGSC0003DMG400004649
Solanum tuberosum
PGSC0003DMG400004649
N
TCM_042392
Theobroma cacao
TCM_042392
N
TCM_040833
Theobroma cacao
TCM_040833
N
SCL3
Vitis vinifera
VIT_06s0009g02390
N
VIT_13s0019g01220
Vitis vinifera
VIT_13s0019g01220
N