CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTRG_09915
(
Pyrenophora triticirepentis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PTRG_09915
T379575_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01243
M02588_2.00
Neurospora crassa
NNNSCGN
NCGSNNN
PBM
Weirauch et al.(2014)
pTH8917
0.589
0.889
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDU42966
Zinc cluster
577
615
RCQRCRKSKKGCDRQRPCQRCKDAGISADGCVSEDEGNG
Links
Other
Zinc cluster
family TFs
Other
Pyrenophora triticirepentis
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BOTBODRAFT_112983
Botryobasidium botryosum
BOTBODRAFT_112983
N
V565_076910
Rhizoctonia solani
V565_076910
N
M408DRAFT_272137
Serendipita vermifera
M408DRAFT_272137
N