PVAR5_4882 (Byssochlamys spectabilis)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 PVAR5_4882 T382531_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02525
M02596_2.00 		Neurospora crassa
NNNNHCGGNN
NNCCGDNNNN		 PBM
Weirauch et al.(2014)
pTH8964 		0.563 0.718
ANIA_09147
M02574_2.00 		Aspergillus nidulans
NNNNHCGGNN
NNCCGDNNNN		 PBM
Weirauch et al.(2014)
pTH8347 		0.562 0.795
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GAD96232 Zinc cluster 102 145

Links

Other Zinc cluster family TFs
Other Byssochlamys spectabilis TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g06169 Acanthocheilonema viteae nAv.1.0.1.g06169 I
Alligator_sinensis_CCG020374.1 Alligator sinensis Alligator_sinensis_CCG020374.1 I
ANCCAN_29852 Ancylostoma caninum ANCCAN_29852 I
ANCCEY_10108 Ancylostoma ceylanicum ANCCEY_10108 I
ANCDUO_21978 Ancylostoma duodenale ANCDUO_21978 I
ACAC_0000529401 Angiostrongylus cantonensis ACAC_0000529401 I
ACOC_0001130401 Angiostrongylus costaricensis ACOC_0001130401 I
ENSACAG00000016280 Anolis carolinensis ENSACAG00000016280 I
ASU_07002 Ascaris suum ASU_07002 I
ENSAMXG00000014504 Astyanax mexicanus ENSAMXG00000014504 I
ENSBTAP00000017584-D1 Bos grunniens ENSBTAP00000017584-D1 I
ENSBTAG00000013213 Bos taurus ENSBTAG00000013213 I
Bm9236 Brugia malayi Bm9236 I
BTMF_0000075201 Brugia timori BTMF_0000075201 I
CBG14844 Caenorhabditis briggsae CBG14844 I
odd-2 Caenorhabditis elegans WBGene00003846 D
CJA04579 Caenorhabditis japonica CJA04579 I
CRE00192 Caenorhabditis remanei CRE00192 I
CRE25083 Caenorhabditis remanei CRE25083 I
ENSCPOG00000020572 Cavia porcellus ENSCPOG00000020572 I
ENSCSAG00000012312 Chlorocebus sabaeus ENSCSAG00000012312 I
ENSCING00000006616 Ciona intestinalis ENSCING00000006616 I
CGI_10012022 Crassostrea gigas CGI_10012022 I
osr2 Danio rerio ENSDARG00000038006 I
DICVIV_08037 Dictyocaulus viviparus DICVIV_08037 I
nDi.2.2.2.g05871 Dirofilaria immitis nDi.2.2.2.g05871 I
DME_0000745901 Dracunculus medinensis DME_0000745901 I
EEL_0000443001 Elaeophora elaphi EEL_0000443001 I
EVEC_0001078501 Enterobius vermicularis EVEC_0001078501 I
ENSFCAG00000014220 Felis catus ENSFCAG00000014220 I
ENSGMOG00000016368 Gadus morhua ENSGMOG00000016368 I
osr2 Gasterosteus aculeatus ENSGACG00000003524 I
Gfo_R006005 Geospiza fortis Gfo_R006005 I
GPUH_0001513701 Gongylonema pulchrum GPUH_0001513701 I
HCOI00889400 Haemonchus contortus HCOI00889400 I
HPLM_0001493201 Haemonchus placei HPLM_0001493201 I
OSR2 Homo sapiens ENSG00000164920 D
ENSSTOG00000021263 Ictidomys tridecemlineatus ENSSTOG00000021263 I
ENSLOCG00000009790 Lepisosteus oculatus ENSLOCG00000009790 I
nLs.2.1.2.g06827 Litomosoides sigmodontis nLs.2.1.2.g06827 I
LOAG_00579 Loa loa LOAG_00579 I
LotgiG130661 Lottia gigantea LotgiG130661 I
LotgiG102775 Lottia gigantea LotgiG102775 I
ENSLAFG00000009420 Loxodonta africana ENSLAFG00000009420 I
ENSMPUG00000015246 Mustela putorius furo ENSMPUG00000015246 I
Osr2 Mus musculus ENSMUSG00000022330 D
ENSMLUG00000013412 Myotis lucifugus ENSMLUG00000013412 I
NECAME_08408 Necator americanus NECAME_08408 I
NBR_0000990501 Nippostrongylus brasiliensis NBR_0000990501 I
nOo.2.0.1.g01159 Onchocerca ochengi nOo.2.0.1.g01159 I
WBGene00239217 Onchocerca volvulus WBGene00239217 I
Ogr10172 Ophisaurus gracilis Ogr10172 I
ENSOCUG00000022383 Oryctolagus cuniculus ENSOCUG00000022383 I
ENSPANG00000012764 Papio anubis ENSPANG00000012764 I
ENSPSIG00000011787 Pelodiscus sinensis ENSPSIG00000011787 I
ENSPFOG00000012273 Poecilia formosa ENSPFOG00000012273 I
scaffold395-EXSNAP2012.4 Pristionchus exspectatus scaffold395-EXSNAP2012.4 I
Ppa-odd-1 Pristionchus pacificus PPA09938 I
Osr2 Rattus norvegicus ENSRNOG00000011136 I
ENSSHAG00000007793 Sarcophilus harrisii ENSSHAG00000007793 I
OSR2 Sus scrofa ENSSSCG00000006073 I
SMUV_0000818001 Syphacia muris SMUV_0000818001 I
ENSTGUG00000012027 Taeniopygia guttata ENSTGUG00000012027 I
osr2 Takifugu rubripes ENSTRUG00000011070 I
osr2 Tetraodon nigroviridis ENSTNIG00000013301 I
TCNE_0000229401 Toxocara canis TCNE_0000229401 I
osr2.L Xenopus laevis XB-GENE-864802 I
osr2.S Xenopus laevis XB-GENE-6254720 I
ENSXMAG00000002498 Xiphophorus maculatus ENSXMAG00000002498 I