VDBG_06746 (Verticillium alfalfae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VDBG_06746 T387538_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
vad-3
M02614_2.00 		Neurospora crassa
NNNCGGCANWT
AWNTGCCGNNN		 PBM
Weirauch et al.(2014)
pTH7811 		0.660 0.974
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEY20636 Zinc cluster 122 160

Links

Other Zinc cluster family TFs
Other Verticillium alfalfae TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000008947-D1 Bos grunniens ENSBTAP00000008947-D1 I
ZNF180 Bos taurus ENSBTAG00000006805 I
ZNF180 Callithrix jacchus ENSCJAG00000013239 I
ZNF180 Canis familiaris ENSCAFG00000029871 I
ENSCSAG00000003312 Chlorocebus sabaeus ENSCSAG00000003312 I
ENSDNOG00000006444 Dasypus novemcinctus ENSDNOG00000006444 I
ZNF180 Echinops telfairi ENSETEG00000004383 I
ZNF180 Equus caballus ENSECAG00000006648 I
ZNF180 Homo sapiens ENSG00000167384 D
ENSSTOG00000028221 Ictidomys tridecemlineatus ENSSTOG00000028221 I
ENSMMUP00000001596 Macaca fascicularis ENSMMUP00000001596 I
ZNF180 Macaca mulatta ENSMMUG00000001193 I
ENSMPUG00000006445 Mustela putorius furo ENSMPUG00000006445 I
ZNF180 Myotis lucifugus ENSMLUG00000013488 I
ZNF180 Ochotona princeps ENSOPRG00000007216 I
ZNF180 Otolemur garnettii ENSOGAG00000006831 I
ENSOARG00000009071 Ovis aries ENSOARG00000009071 I
ZNF180 Pan troglodytes ENSPTRG00000011117 I
ENSPANG00000005271 Papio anubis ENSPANG00000005271 I
ENSPPYG00000010090 Pongo abelii ENSPPYG00000010090 I
ZNF180 Procavia capensis ENSPCAG00000000120 I
ENSSSCG00000026699 Sus scrofa ENSSSCG00000026699 I
ENSTSYG00000012856 Tarsius syrichta ENSTSYG00000012856 I
ZNF180 Tursiops truncatus ENSTTRG00000014028 I