Scas_Contig679.26 (Saccharomyces castellii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 Scas_Contig679.26 T390704_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
UPC2
M00920_2.00 		Saccharomyces cerevisiae
NTCGTWYVN
NBRWACGAN		 PBM
Gordan et al.(2011)
Upc2 		0.594 0.718
UPC2
M07508_2.00 		Saccharomyces cerevisiae
NRWACGA
TCGTWYN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0411.1 		0.594 0.718
UPC2
M08654_2.00 		Saccharomyces cerevisiae
NRWACGA
TCGTWYN		 Misc
DeBoer et al.(2011)
YDR213W_544 		0.594 0.718
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig679.26 Zinc cluster 56 95

Links

Other Zinc cluster family TFs
Other Saccharomyces castellii TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N
ENSBTAP00000049357-D1 Bos grunniens ENSBTAP00000049357-D1 N
HMGB1 Bos taurus ENSBTAG00000014862 N
ENSBTAG00000020685 Bos taurus ENSBTAG00000020685 N
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N
ENSCJAG00000033913 Callithrix jacchus ENSCJAG00000033913 N
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N
hmgb1a Danio rerio ENSDARG00000099175 N
ENSDNOG00000041663 Dasypus novemcinctus ENSDNOG00000041663 N
ENSDNOG00000046844 Dasypus novemcinctus ENSDNOG00000046844 N
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N
ENSECAG00000003655 Equus caballus ENSECAG00000003655 N
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N
ENSSTOG00000007009 Ictidomys tridecemlineatus ENSSTOG00000007009 N
ENSMMUP00000017448 Macaca fascicularis ENSMMUP00000017448 N
ENSMMUP00000022848 Macaca fascicularis ENSMMUP00000022848 N
ENSMMUG00000019832 Macaca mulatta ENSMMUG00000019832 N
HMGB2 Macaca mulatta ENSMMUG00000020008 N
ENSMMUG00000018606 Macaca mulatta ENSMMUG00000018606 N
ENSMMUG00000017359 Macaca mulatta ENSMMUG00000017359 N
ENSMMUG00000013266 Macaca mulatta ENSMMUG00000013266 N
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N
HMGB1 Microcebus murinus ENSMICG00000006213 N
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N
HMGB1 Monodelphis domestica ENSMODG00000004443 N
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N
Myotis_brandtii_Hmgb1_10026956 Myotis brandtii Myotis_brandtii_Hmgb1_10026956 N
Myotis_brandtii_Hmgb1_10003213 Myotis brandtii Myotis_brandtii_Hmgb1_10003213 N
ENSOCUG00000016030 Oryctolagus cuniculus ENSOCUG00000016030 N
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N
ENSOGAG00000034801 Otolemur garnettii ENSOGAG00000034801 N
ENSOGAG00000033550 Otolemur garnettii ENSOGAG00000033550 N
ENSOGAG00000033437 Otolemur garnettii ENSOGAG00000033437 N
ENSOGAG00000033253 Otolemur garnettii ENSOGAG00000033253 N
ENSOGAG00000032240 Otolemur garnettii ENSOGAG00000032240 N
ENSOGAG00000032325 Otolemur garnettii ENSOGAG00000032325 N
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N
ENSOGAG00000027410 Otolemur garnettii ENSOGAG00000027410 N
ENSOGAG00000029748 Otolemur garnettii ENSOGAG00000029748 N
ENSOGAG00000030052 Otolemur garnettii ENSOGAG00000030052 N
ENSOGAG00000030563 Otolemur garnettii ENSOGAG00000030563 N
ENSOARG00000005357 Ovis aries ENSOARG00000005357 N
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N
LOC100911637 Rattus norvegicus ENSRNOG00000048471 N
LOC100911637 Rattus norvegicus ENSRNOG00000048094 N
LOC108350839 Rattus norvegicus ENSRNOG00000038437 N
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N
Hmgb1-ps3 Rattus norvegicus ENSRNOG00000032420 N
AABR07025074.1 Rattus norvegicus ENSRNOG00000032550 N
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N
HMGB2 Sus scrofa ENSSSCG00000009704 N
ENSTBEG00000016187 Tupaia belangeri ENSTBEG00000016187 N
ENSTBEG00000017117 Tupaia belangeri ENSTBEG00000017117 N
ENSTBEG00000015758 Tupaia belangeri ENSTBEG00000015758 N
ENSTBEG00000014925 Tupaia belangeri ENSTBEG00000014925 N
HMGB1 Tupaia belangeri ENSTBEG00000013046 N
ENSTBEG00000012989 Tupaia belangeri ENSTBEG00000012989 N
ENSTBEG00000009427 Tupaia belangeri ENSTBEG00000009427 N
BAA06440 Xenopus laevis BAA06440 N
hmgb2.S Xenopus laevis XB-GENE-1000251 N