22689_YPR196W (Saccharomyces paradoxus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 22689_YPR196W T390828_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MAL63_YEASX
M11473_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MAL63_Q5 		0.614 0.895
YPR196W
M00110_2.00 		Saccharomyces cerevisiae
NCGGDNWWWH
DWWWNHCCGN		 PBM
Badis et al.(2008)
YPR196W_2047 		0.612 0.921
YPR196W
M01601_2.00 		Saccharomyces cerevisiae
CGGARAAA
TTTYTCCG		 PBM
Zhu et al.(2009)
Ypr196w 		0.612 0.921
YPR196W
M07537_2.00 		Saccharomyces cerevisiae
CGGRDWAWY
RWTWHYCCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0437.1 		0.612 0.921
YPR196W
M08700_2.00 		Saccharomyces cerevisiae
NNWNNBCGGRDAAWTHNNNND
HNNNNDAWTTHYCCGVNNWNN		 Misc
DeBoer et al.(2011)
YPR196W_861 		0.612 0.921
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
22689_YPR196W Zinc cluster 6 43

Links

Other Zinc cluster family TFs
Other Saccharomyces paradoxus TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g10331 Acanthocheilonema viteae nAv.1.0.1.g10331 N
ACYPI008472 Acyrthosiphon pisum ACYPI008472 N
AAEL006442 Aedes aegypti AAEL006442 N
ANCCEY_03889 Ancylostoma ceylanicum ANCCEY_03889 N
ANCDUO_04811 Ancylostoma duodenale ANCDUO_04811 N
AALB000181 Anopheles albimanus AALB000181 N
AATE009647 Anopheles atroparvus AATE009647 N
AATE014909 Anopheles atroparvus AATE014909 N
ACOM030314 Anopheles coluzzii ACOM030314 N
ACUA008223 Anopheles culicifacies ACUA008223 N
ADAC002219 Anopheles darlingi ADAC002219 N
ADIR006376 Anopheles dirus ADIR006376 N
AFAF015060 Anopheles farauti AFAF015060 N
AFUN010904 Anopheles funestus AFUN010904 N
AGAP008230 Anopheles gambiae AGAP008230 N
AMAM010681 Anopheles maculatus AMAM010681 N
AMAM003525 Anopheles maculatus AMAM003525 N
AMEM000477 Anopheles merus AMEM000477 N
AQUA010556 Anopheles quadriannulatus AQUA010556 N
ASIS020914 Anopheles sinensis ASIS020914 N
GB53689 Apis mellifera GB53689 N
ACEP20625 Atta cephalotes ACEP20625 N
ENSCJAG00000002653 Callithrix jacchus ENSCJAG00000002653 N
Cmyd_10015925 Chelonia mydas Cmyd_10015925 N
CLEC004692 Cimex lectularius CLEC004692 N
CpipJ_CPIJ009409 Culex pipiens CpipJ_CPIJ009409 N
CPIJ009409 Culex quinquefasciatus CPIJ009409 N
KGM_07336 Danaus plexippus KGM_07336 N
DAPPUDRAFT_7670 Daphnia pulex DAPPUDRAFT_7670 N
YQE_05797 Dendroctonus ponderosae YQE_05797 N
YQE_05795 Dendroctonus ponderosae YQE_05795 N
GF14489 Drosophila ananassae FBgn0091516 N
GG21686 Drosophila erecta FBgn0113864 N
GH11201 Drosophila grimshawi FBgn0118682 N
CG10348 Drosophila melanogaster FBgn0032707 N
ham Drosophila melanogaster FBgn0045852 N
GI18122 Drosophila mojavensis FBgn0140862 N
GI18124 Drosophila mojavensis FBgn0140864 N
GL18694 Drosophila persimilis FBgn0156295 N
GA10264 Drosophila pseudoobscura FBgn0070322 N
GM17064 Drosophila sechellia FBgn0171976 N
GJ17748 Drosophila virilis FBgn0204917 N
GK15538 Drosophila willistoni FBgn0217543 N
GE12710 Drosophila yakuba FBgn0230434 N
EVEC_0001319001 Enterobius vermicularis EVEC_0001319001 N
GPLIN_000816800 Globodera pallida GPLIN_000816800 N
HHAL009557-PA Halyomorpha halys HHAL009557-PA N
HMEL002495 Heliconius melpomene HMEL002495 N
ENSSTOG00000023479 Ictidomys tridecemlineatus ENSSTOG00000023479 N
LDEC009263 Leptinotarsa decemlineata LDEC009263 N
nLs.2.1.2.g06419 Litomosoides sigmodontis nLs.2.1.2.g06419 N
LOAG_01298 Loa loa LOAG_01298 N
LCUP013771 Lucilia cuprina LCUP013771 N
LLOJ003763 Lutzomyia longipalpis LLOJ003763 N
LLOJ003850 Lutzomyia longipalpis LLOJ003850 N
MCINX008948 Melitaea cinxia MCINX008948 N
MDOA001127 Musca domestica MDOA001127 N
Myotis_brandtii_Prdm16_10023972 Myotis brandtii Myotis_brandtii_Prdm16_10023972 N
NV11691 Nasonia vitripennis NV11691 N
OESDEN_18342 Oesophagostomum dentatum OESDEN_18342 N
PHUM496080 Pediculus humanus PHUM496080 N
PPAI005886 Phlebotomus papatasi PPAI005886 N
PPAI005885 Phlebotomus papatasi PPAI005885 N
nRc.2.0.1.g25507 Romanomermis culicivorax nRc.2.0.1.g25507 N
SBAD_0000285901 Soboliphyme baturini SBAD_0000285901 N
SINV18128 Solenopsis invicta SINV18128 N
SMUV_0000946701 Syphacia muris SMUV_0000946701 N
TC006419 Tribolium castaneum TC006419 N
D917_07104 Trichinella nativa D917_07104 N
EFV51761 Trichinella spiralis EFV51761 N
TMUE_s0068003800 Trichuris muris TMUE_s0068003800 N
D918_00910 Trichuris suis D918_00910 N
TTRE_0000709701 Trichuris trichiura TTRE_0000709701 N
WUBG_02748 Wuchereria bancrofti WUBG_02748 N